Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0500 ATGGAAGGTTTCTTTCCCGACAAATTTCTAGACGATACTTTCTGGGATGAATCTTTTGAAAATCAGCATGATTTTCTCCTGTCTGCAGAGATTGAGACTCGCCAAGAAAGATTTCATGTCGGATCGAGTTCCCAGAACTCCATTGTTGAAGACAAACCTCCTCCTCCTTCTGCTAATCACAGTGATTTTCTTCAGTATAATGACCGTCTTAGAGTTGGGTTCGGGCAAGAAACTTCTCAGAACGTGTTGAATTCAGATGAAGGTCCTTTTGTTCAATACAGTGACGTACCAGGAATTAACACGGAAGATCATGGCCATGGAGTTTCTCCTGCTGGAAATCGAAGTGCTTTTGTTCAATACAGAGAGCTACCCAAAACAGGGCATGGTGAAGGAAGCTCAAATGATATGAACATGAGAAGGATGATGATTGATTACATGGGAAAAAGTTGTCATGAAGAGAGAAACAACATGGCAGAGTATGAAAGAGAACGAGGTTTCAGGCATATGATTAACGAGAGGATGAGAAGGCAGAGACAGAGGCAGGGTTGCTTGGCCCTGCATTCAATATTACCATTTGGAACCAAGAACGACGTTAATTCGGTGGTTCTAATGGCGGCGAAGGAGATTCAAAGGCTAGAAGCTTGCAGGGATGAATTGAAGAGGCAAAATACAGGACTTGAAGAGAAACTTAAAGGGGTAGAAGGAAACAGAGTTGAGTTGAGGGTGGCTCATCCTACGTCTCGGATAGATTCAATGCTTCAGACTCTTCAATTATTGACGGAGCTTGGAATGAATACAAGAAGCATCACATCAAATTTCTCTCACCAAGAGTTGTTTGCCTTGTTAGAGATTCATGCTAAGGTATCTGCTCCCACATCAATGAATAAATGTGTTGGATATGAAATCTGA 909 0.4202 MEGFFPDKFLDDTFWDESFENQHDFLLSAEIETRQERFHVGSSSQNSIVEDKPPPPSANHSDFLQYNDRLRVGFGQETSQNVLNSDEGPFVQYSDVPGINTEDHGHGVSPAGNRSAFVQYRELPKTGHGEGSSNDMNMRRMMIDYMGKSCHEERNNMAEYERERGFRHMINERMRRQRQRQGCLALHSILPFGTKNDVNSVVLMAAKEIQRLEACRDELKRQNTGLEEKLKGVEGNRVELRVAHPTSRIDSMLQTLQLLTELGMNTRSITSNFSHQELFALLEIHAKVSAPTSMNKCVGYEI 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0500 302 MobiDBLite consensus disorder prediction 39 62 - -
Lele22g0500 302 Coils Coil 202 236 - -
Lele22g0500 302 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 35 288 IPR044658 -
Lele22g0500 302 MobiDBLite consensus disorder prediction 79 110 - -
Lele22g0500 302 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 159 226 IPR036638 GO:0046983
Lele22g0500 302 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 163 212 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0500 Lele-ChrLele22 3162577 3163567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0500 114 288 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 38.251 4.46e-32 117