Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0481 ATGGTGGGGTTGCCGGGAGTAGAGCCGGCAGCCAACTCTCCCACCCTCAACAAACGCCACCCCGATCTTTCCATTAACGATAGCAGCGGTGGGAGCGGCAACCGAGAAGACAATGATGAAAGAGAAAACGGAGACGAGCCCAAGGAGGGCGCAGTCGATGTCGGGACCCGCCGGCCCAGGGGCCGACCTCCCGGCTCCAAAAATAAACCCAAGCCACCCATCTTCGTCACCCGAGACAGTCCAAACGCCCTAAGAAGCCACGTGATGGAAGTTGCCGGTGGAGCCGACGTTGCAGAGAGTGTGGCTCAATTCGCGAGGAGGCGTCAGCGTGGCGTTTGTGTTCTCAGTGGGAGCGGCTCCGTCGCCAACGTAACTCTCCGACAACCCGCTGCTCCAGGAGCTGTTGTGGCCCTCCATGGCAGGTTTGAAATTTTATCCCTAACAGGTGCGCTCTTGCCGGGACCCGCTCCTCCCGGCGCGACAGGGCTCACGGTCTATCTCGCAGGAGGACAAGGACAGGTTGTGGGAGGAAGTGTCGTCGGGTCTCTAGTAGCGGCCGGACCAGTGATGGTCATTGCTGCGACTTTTGCTAATGCGACTTACGAAAGACTACCACTTGATGATGATGATGAGGGAGCCAGCGCCGCGGCACAAGGAGGAGGGTCACCACGGGGAATCGGTAGCAGCGGGTGCCAGTCTCTGCCGGCGGGACTTCCGGATCCGTCGTCTCTGCCTTTGTACAATCTGCCGCCGAATCTGATGCCCAACGGGGTTGGAGGGCAGCAGGTGGTTCATGAAGCTTTTGCTTGGGCTCAGGGAAGGCCACCTTACTGA 834 0.5983 MVGLPGVEPAANSPTLNKRHPDLSINDSSGGSGNREDNDERENGDEPKEGAVDVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGALLPGPAPPGATGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLDDDDEGASAAAQGGGSPRGIGSSGCQSLPAGLPDPSSLPLYNLPPNLMPNGVGGQQVVHEAFAWAQGRPPY 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0481 277 MobiDBLite consensus disorder prediction 33 56 - -
Lele22g0481 277 FunFam AT-hook motif nuclear-localized protein 84 211 - -
Lele22g0481 277 PIRSF ESCAROLA 6 277 IPR014476 GO:0003680
Lele22g0481 277 ProSiteProfiles PPC domain profile profile. 81 219 IPR005175 -
Lele22g0481 277 Gene3D - 84 213 - -
Lele22g0481 277 MobiDBLite consensus disorder prediction 1 81 - -
Lele22g0481 277 Pfam Plants and Prokaryotes Conserved (PCC) domain 85 197 IPR005175 -
Lele22g0481 277 MobiDBLite consensus disorder prediction 209 234 - -
Lele22g0481 277 SUPERFAMILY AF0104/ALDC/Ptd012-like 81 209 - -
Lele22g0481 277 MobiDBLite consensus disorder prediction 17 32 - -
Lele22g0481 277 CDD DUF296 85 168 IPR005175 -
Lele22g0481 277 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 30 272 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0481 Lele-ChrLele22 3034366 3036191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0481 17 277 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 63.396 2.11e-96 283