Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0479 ATGACTAGTTCAGAGAATTATTCGAGCGAAGAGACTGATCAGCTAGAAGATGCAGATTCAGGAGGGACCAGACGCTCTTACGAGTGCACATTTTGCAGAAGGGGCTTCACCAACGCTCAGGCGTTAGGGGGTCACATGAATATTCATAGAAAAGACAGAGCCAAGGCCAAACAAAGTACCCCTAATAATAATAGTTCTTCCTTGTTTTCAAACAAATTGTCCAATGACGAGTCCTTCGCATCAGCCTCCCCTTTTCTTTCTGAAATATCCTCAGGCCAACAATCCTCAAGGTTTTACTCCATTTTCGAGGTTCAGGGACACTATAACATGTATTTCCAGCAGTCTTCTGCAACAAACCCTAGAAACCCTTCTCCTGCAACATATGCCTTTCCCTTTGAGTATCTCAATCCGAGGACTCATCGTCAGTCTGTGGATATGAACGAAGAGCTTCTAGGGGCCAATTTGAGTCTCCAGATTGGTCCGAGTCATCATGTGGAAAGTACTCAGAAAGACGGCGAAGTGGATTTAGAGCTCAGACTTGGCCATCATCCATATTGA 558 0.448 MTSSENYSSEETDQLEDADSGGTRRSYECTFCRRGFTNAQALGGHMNIHRKDRAKAKQSTPNNNSSSLFSNKLSNDESFASASPFLSEISSGQQSSRFYSIFEVQGHYNMYFQQSSATNPRNPSPATYAFPFEYLNPRTHRQSVDMNEELLGANLSLQIGPSHHVESTQKDGEVDLELRLGHHPY 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0479 185 MobiDBLite consensus disorder prediction 1 24 - -
Lele22g0479 185 MobiDBLite consensus disorder prediction 50 71 - -
Lele22g0479 185 ProSitePatterns Zinc finger C2H2 type domain signature. 29 49 IPR013087 -
Lele22g0479 185 PANTHER OS07G0101800 PROTEIN 1 183 - -
Lele22g0479 185 Gene3D Classic Zinc Finger 6 83 - -
Lele22g0479 185 MobiDBLite consensus disorder prediction 166 185 - -
Lele22g0479 185 SUPERFAMILY beta-beta-alpha zinc fingers 24 53 IPR036236 -
Lele22g0479 185 ProSiteProfiles Zinc finger C2H2 type domain profile. 27 54 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0479 Lele-ChrLele22 2995970 2996527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0479 19 70 C2H2 Transcription Factor Family AT3G09290 57.692 1.66e-16 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele22g0479 None None None