Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0473 ATGGATTGGCTAGAAGGCGGTAGCTGCTGGGATTTCCTCGATTACTGCTTGACCGACGATACCCCGCCTGCGCCCACCGATTTTCTATGGTCCAATCAGAGTGTGAGCTCGGGAACTGACTTTTCAGGCGGTGCTATTGCTCCTCAAGAGAAGGCCCGGAAGAGAGGACGGCCCAATTTATCTAGCAAACCAGGAGCAAAAGCTTGTCGTGAGAAAATGCGGAGGGAGAAACTGAATGACAGATTTTGTGACTTGAGCTCTGTTCTGGAGCCTGGGAGACCTGTGAAGACTGATAAATCAGCTATACTTGATGATGCCATCAGAATTTTGAATCAACTTAAAAATGAAGCTCAGGAACTCAAAGAAACAAATGAGAAATTGTTAGAGGAAATAAAATCATTGAAGGAAGAGAAACATGAACTTCGTGAAGAGAAACTTGTTCTGAAAGCTGATAAAGAAAGGATTGAGACGCAGTTAAAAGCACCGCCTGTTTCACCTGCAGGATTTATGCTTCCCCATGCAGCTGCTTATCAAGCTGGGGTCAACAAAATGGCTGTTTACCCAAGCTATGGTTATTATCCCATGTGGCAATATCTGCAACCGTCTGCTCGAGATACGTCGCAGGATCATGAACTCAGGCCTCCAGCTGCTTAG 654 0.4587 MDWLEGGSCWDFLDYCLTDDTPPAPTDFLWSNQSVSSGTDFSGGAIAPQEKARKRGRPNLSSKPGAKACREKMRREKLNDRFCDLSSVLEPGRPVKTDKSAILDDAIRILNQLKNEAQELKETNEKLLEEIKSLKEEKHELREEKLVLKADKERIETQLKAPPVSPAGFMLPHAAAYQAGVNKMAVYPSYGYYPMWQYLQPSARDTSQDHELRPPAA 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0473 217 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 62 128 IPR036638 GO:0046983
Lele22g0473 217 Coils Coil 103 158 - -
Lele22g0473 217 MobiDBLite consensus disorder prediction 40 65 - -
Lele22g0473 217 Gene3D - 66 146 IPR036638 GO:0046983
Lele22g0473 217 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 62 113 IPR011598 GO:0046983
Lele22g0473 217 PANTHER BHLH TRANSCRIPTION FACTOR 7 217 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Lele22g0473 217 Pfam Helix-loop-helix DNA-binding domain 66 113 IPR011598 GO:0046983
Lele22g0473 217 SMART finulus 68 119 IPR011598 GO:0046983
Lele22g0473 217 CDD bHLH_AtILR3_like 67 142 - -
Lele22g0473 217 FunFam Transcription factor bHLH104 65 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0473 Lele-ChrLele22 2954717 2956937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0473 35 217 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 63.874 9.84e-73 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele22g0473 HLH 7.7e-09 No_clan