Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0464 ATGTCGTTTTCTTATGCCTATATGAATGGGAGGGAAAAGAAGTGCAAGCCAAGCCAAGCCCTGGGAATGGACCGTGGGGTTCTTGATTCTGTGATCAACAGGCTACTTGAAGTCAGAGGGAGACCTGGGAAGCTGGTGAATCTCGCAGAAACAGAAATCAGGCAGCTCTGTTTTGTCTCCAGGGATATCTTCTTCAGGCAGCCCAATCTGTTGGAACTTGAAGCTCCAATCAAGATCTGTGGAGACATTCATGGTCAATATCCTGACCTGCTGAGACTTCTTGATCATGGTGGATTACCCCCTCGCTCCAATTACTTGTTCTTAGGGGATTACGTGGATCGCGGCAAGCAAAGTCTGGAGACAATTTGTCTTCTTCTTGCCTATAAAATAAAGTACCCAGATAACTTTTTCCTTCTAAGGGGCAACCATGAATGTGCTTCTATCAACCGTATCTATGGATTCTACGATGAATGTAAGCAAAGATACAACGTCAGGCTCTGGAAAATATTCACAGATTGTTTCAACTGCTTGCCCGTGGCAGCTCTTATCGACGAAAAAATACTATGCATGCATGGGGGACTCTCCCCTGAGTTGTACAACTTCAACCAGATTAGGACTTTACCTCGTCCTTGTGAAGTACCTGAATCTGGTCTGCTATGTGATCTCCTCTGGTCTGATCCTTCTAAACATATTTACGGTTGGGGAGCAAACGAACGCGGCGTTTCGTATACTTTCGGTGCTGATAGGGTGACAGAATTTCTTCGAAAGAACGATCTGGACTTAATCTGTAGAGCTCACCAGGTTGTGGAAGATGGATATGAGTTCTTTGCTAATAGACAACTTGTGACTGTGTTCTCAGCACCAAATTATTGTGGAGAGTTTGACAATGCTGGTGCCATGATGACTGTTGATGAGACGCTTATGTGCTCTTTCCAAATTTTAAGGCCTATGGAGAAAAAACCGAGGTTTGGCTTTGGAAGCACAGCAACGGTCAAGCCTAGTACTCCAACTAAAATAAAGTCAGAGATGTTGACCACTGTAAATTCTGATGGTGAAGGTGCTAAGTTTCCTCGCTCATCCGGTTTGGTAAAGTCTGTATGGTGTAGGCACTTGCAAATTTGCACCATCAACAAGCTAATGGGTTTTGACAATTTCCAGCATTGCGTCATCTATGATTAG 1179 0.4419 MSFSYAYMNGREKKCKPSQALGMDRGVLDSVINRLLEVRGRPGKLVNLAETEIRQLCFVSRDIFFRQPNLLELEAPIKICGDIHGQYPDLLRLLDHGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPDNFFLLRGNHECASINRIYGFYDECKQRYNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPELYNFNQIRTLPRPCEVPESGLLCDLLWSDPSKHIYGWGANERGVSYTFGADRVTEFLRKNDLDLICRAHQVVEDGYEFFANRQLVTVFSAPNYCGEFDNAGAMMTVDETLMCSFQILRPMEKKPRFGFGSTATVKPSTPTKIKSEMLTTVNSDGEGAKFPRSSGLVKSVWCRHLQICTINKLMGFDNFQHCVIYD 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0464 392 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 25 320 - -
Lele22g0464 392 SMART pp2a_7 48 318 IPR006186 GO:0016787
Lele22g0464 392 Gene3D - 21 327 IPR029052 -
Lele22g0464 392 PRINTS Serine/threonine phosphatase family signature 201 228 IPR006186 GO:0016787
Lele22g0464 392 PRINTS Serine/threonine phosphatase family signature 172 198 IPR006186 GO:0016787
Lele22g0464 392 PRINTS Serine/threonine phosphatase family signature 280 296 IPR006186 GO:0016787
Lele22g0464 392 PRINTS Serine/threonine phosphatase family signature 258 278 IPR006186 GO:0016787
Lele22g0464 392 PRINTS Serine/threonine phosphatase family signature 138 162 IPR006186 GO:0016787
Lele22g0464 392 PRINTS Serine/threonine phosphatase family signature 105 132 IPR006186 GO:0016787
Lele22g0464 392 PRINTS Serine/threonine phosphatase family signature 76 103 IPR006186 GO:0016787
Lele22g0464 392 SUPERFAMILY Metallo-dependent phosphatases 41 320 IPR029052 -
Lele22g0464 392 Pfam Serine-threonine protein phosphatase N-terminal domain 28 74 IPR031675 -
Lele22g0464 392 Pfam Calcineurin-like phosphoesterase 76 268 IPR004843 GO:0016787
Lele22g0464 392 FunFam Serine/threonine-protein phosphatase 20 324 - -
Lele22g0464 392 CDD MPP_PP1_PPKL 27 316 - -
Lele22g0464 392 ProSitePatterns Serine/threonine specific protein phosphatases signature. 139 144 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0464 Lele-ChrLele22 2876103 2882034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0464 42 261 Calmodulin-binding Proteins AT5G63870 32.061 1.43e-28 111