Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0458 ATGGTATTTCGAGGAAGGAAGAAAAGATTAACAATGGTGAGAGCTCCTTGCTGTGAGAAGATGGGACTGAAGAAGGGTCCTTGGACTACCGAGGAAGACCAACTTTTGGTCTCCTACATTCAAAAACATGGCCATGGGAATTGGCGAGCCCTCCCAAAGCAAGCTGGTCTTCTGAGATGTGGGAAGAGTTGCAGACTACGCTGGATCAATTACTTAAGGCCAGACATAAAGAGAGGAAATTTCACACCAGAAGAAGAAGAAATCATCATTAAGCAGCATGAGATGCTTGGCAACAAGTGGTCAGCAATTGCAGCAAATTTACCAGGAAGAACAGACAACGAGATAAAAAATGTGTGGCACACCCACTTGAAGAAGAGGCTTCAAAAAACAACCATTATTAATTCAGATTCCAAAACCAGATCATCTGCAGGCTCCAAACCTTCAATCCAACGATCTTTTTCCAATTCCAGCACGGTGACAAATCAATCATCAGAACCTGCGATGAGTTTCATCGGTTTCCCAGAACAGGACACGACAACATCATCGTCAGTTTCAGCATCATGCACTACTACAACTTCTTCTAGGGATTGTGGGCAGAGCATGAATGTGGCCATCAAGTGTGAAGACATAGATTCATCCGTGGAGCCTTATGTGTTGCCTCAGATTGATGAAAGCTTTTGGTCAAAAGCAGCAATGGATGATAATAGTGCCACCATTGAAAATGAATTACCAGTTCAACAATACCCATTTGATTCTGTAGAATCATCGTCCCAACAAGGTTATTATGGGTATAATAATAGTTCGAACTTTGACGATGGAATGGATTTCTGGTACGATGTATTCATCAGAACAGGGGATTTTACAGAGTTAACGTTCTGA 879 0.4221 MVFRGRKKRLTMVRAPCCEKMGLKKGPWTTEEDQLLVSYIQKHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTPEEEEIIIKQHEMLGNKWSAIAANLPGRTDNEIKNVWHTHLKKRLQKTTIINSDSKTRSSAGSKPSIQRSFSNSSTVTNQSSEPAMSFIGFPEQDTTTSSSVSASCTTTTSSRDCGQSMNVAIKCEDIDSSVEPYVLPQIDESFWSKAAMDDNSATIENELPVQQYPFDSVESSSQQGYYGYNNSSNFDDGMDFWYDVFIRTGDFTELTF 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0458 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 127 IPR017930 -
Lele22g0458 292 SMART sant 77 125 IPR001005 -
Lele22g0458 292 SMART sant 24 74 IPR001005 -
Lele22g0458 292 CDD SANT 27 72 IPR001005 -
Lele22g0458 292 MobiDBLite consensus disorder prediction 130 196 - -
Lele22g0458 292 CDD SANT 80 123 IPR001005 -
Lele22g0458 292 FunFam MYB-related transcription factor 24 77 - -
Lele22g0458 292 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
Lele22g0458 292 SUPERFAMILY Homeodomain-like 21 119 IPR009057 -
Lele22g0458 292 Pfam Myb-like DNA-binding domain 25 72 IPR001005 -
Lele22g0458 292 Pfam Myb-like DNA-binding domain 78 123 IPR001005 -
Lele22g0458 292 ProSiteProfiles Myb-like domain profile. 20 72 IPR001005 -
Lele22g0458 292 Gene3D - 24 77 - -
Lele22g0458 292 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 12 238 - -
Lele22g0458 292 Gene3D - 80 151 - -
Lele22g0458 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 72 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0458 Lele-ChrLele22 2836015 2837782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0458 12 290 MYB Transcription Factor Family AT2G31180 48.936 6.00e-82 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele22g0458 Myb_DNA-binding 1.2e-15 CL0123