Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0446 ATGGAAGCTACAAGGTGCTGCTTTAATAAGTTCAAGTCAAAGGACAAAATGAAGTCTCCCAAGAACAAGGAATCTACAGCTGCTCTAAAAGAAGGGTCAAGACCGCCAACAAATGAAGAAGCACCATCAAATGTGACCAAACAGAAGGCTGCTGCTGCAAAGCAGTACATAGAAAATCATTACAAGAAGCAGATGAAGACCCTGCAGGAGAGGAAGGAGAGACGTAATTTGCTAGAGAAAAACCTGGCTGATGCTGAAGTCTCTGAAGAAGAGCAGAACAACTTGCTTAAGTATTTGGAGAAAAAGGAGACGGAATATATGCGCCTTCAAAGGCATAAGATGGGAGCCGATGATTTTGAGCCATTGACTATGATAGGGAAGGGTGCATTTGGAGAGGTTAGAGTCTGCCGAGAGAAGGCAACTGGTCATGTATATGCTATGAAGAAGCTCAAGAAATCTGAGATGCTTCGTAGAGGCCAGGTTGAACATGTAAAAGCTGAGAGGAACCTACTTGCAGAAGTTGACAGCAATTGCATAGTGAAACTTTACTGTTCCTTTCAAGATGAAGAGTATCTATATCTCATTATGGAGTATCTCCCTGGTGGGGATATGATGACTTTGCTGATGCGGAAGGATACTCTGACAGAAGATGAGGCTAGATTCTATGTTGGGGAGACTGTGCTAGCAATTGAATCAATTCATAAACACAATTACATTCATAGAGACATCAAGCCAGACAACTTGTTGCTAGATAGATACGGTCACATGAAATTATCAGATTTTGGATTATGTAAACCACTAGACTGCAGTAATCTTCAAGAAAAGGATTTTTCTGTTGGAAGCAATTTAAGTGGAGCTCTCAGGAGTGATGGACGTCCTGTGGCACCTAAACGTACTCAACAGGAACAGCTTCAGCATTGGCAGAAAAATAGACGGATGCTTGCCTATTCTACGGTAGGAACACCCGACTATATTGCCCCAGAAGTTCTTCTGAAGAAAGGATATGGGATGGAGTGTGATTGGTGGTCTTTGGGTGCTATAATGTATGAAATGCTTGTGGGGTATCCACCCTTTTATTCAGATGTGCCGATGTCAACTTGTAGAAAGATAGTAAATTGGAGAAATCATTTAAAATTTCCAGAGGAAGCTAAGCTATCTGCAGAGGCAAAGGATCTTATTTGTAGACTCTTATGTAATGTGGACCAGCGACTTGGCACTAAAGGGGCTGATGAAATAAAGGCTCACCCATGGTTCATGGGTATTGAATGGGACAAACTGTACCAAATGAAAGCTGCATTCATTCCTGAGGTCAATGATGAATTAGATACTCAAAATTTTGAGAAGTTTGAAGAGGTTGACAACCAAAATCAGCCTTCTTCAAAATCAGGCCCATGGAGAAAGATGCTGTCATCTAAAGACATTAACTTTGTTGGATACACTTATAAGAACTTCGAAATCGTGAATGATCATCAACTACCCGGAATTGCTGAATTGAAGAAGAGCACAAAACCTAAAAGACCGTCTATTAAGACTCTGTTTGATGATGAGTCAAGTATGGATGCTAAGCAACCAGTCCAAGGGAGCCTCTTAAACCTCCTACCTACTCAGCCGGAAGTTCCAGAGAAGAGTGAATCACAATGA 1641 0.4144 MEATRCCFNKFKSKDKMKSPKNKESTAALKEGSRPPTNEEAPSNVTKQKAAAAKQYIENHYKKQMKTLQERKERRNLLEKNLADAEVSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHMKLSDFGLCKPLDCSNLQEKDFSVGSNLSGALRSDGRPVAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDVPMSTCRKIVNWRNHLKFPEEAKLSAEAKDLICRLLCNVDQRLGTKGADEIKAHPWFMGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEEVDNQNQPSSKSGPWRKMLSSKDINFVGYTYKNFEIVNDHQLPGIAELKKSTKPKRPSIKTLFDDESSMDAKQPVQGSLLNLLPTQPEVPEKSESQ 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0446 546 Coils Coil 61 95 - -
Lele22g0446 546 MobiDBLite consensus disorder prediction 500 517 - -
Lele22g0446 546 Gene3D Phosphorylase Kinase; domain 1 109 204 - -
Lele22g0446 546 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele22g0446 546 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Lele22g0446 546 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele22g0446 546 FunFam Non-specific serine/threonine protein kinase 203 270 - -
Lele22g0446 546 MobiDBLite consensus disorder prediction 12 28 - -
Lele22g0446 546 SMART serkin_6 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0446 546 MobiDBLite consensus disorder prediction 12 51 - -
Lele22g0446 546 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0446 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Lele22g0446 546 SUPERFAMILY Protein kinase-like (PK-like) 93 470 IPR011009 -
Lele22g0446 546 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lele22g0446 546 Gene3D Transferase(Phosphotransferase) domain 1 205 435 - -
Lele22g0446 546 MobiDBLite consensus disorder prediction 521 546 - -
Lele22g0446 546 FunFam Non-specific serine/threonine protein kinase 317 436 - -
Lele22g0446 546 FunFam Non-specific serine/threonine protein kinase 90 202 - -
Lele22g0446 546 CDD STKc_NDR_like 117 482 - -
Lele22g0446 546 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0446 546 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 478 - -
Lele22g0446 546 MobiDBLite consensus disorder prediction 500 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0446 Lele-ChrLele22 2760417 2766850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0446 24 540 AGC Kinase Gene Family AT4G14350 84.942 0.0 915
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lele22g0446 Pkinase 1.1e-63 CL0016