Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0444 ATGGATCGCGTTATTGGTGGAAAATTCAAGCTCGGGCGGAAGATTGGGAGTGGGTCGTTTGGCGAGCTTTATCTGGGCGTTAATGTGCAGAATGGCGAGGAAGTAGGTGTAAAGCTGGAACCTGTGAAGACCAAGCATCCTCAACTTCATTATGAGTCAAAACTATATATGCTTCTCCAAGGAGGAACTGGTATACCCCACTTAAAATGGTTTGGAGTTGAGGGCGATTACAATGTCATGGTTATTGACCTTCTTGGACCAAGTCTAGAAGACTTGTTTAACTATTGCAATAGAAAATTCTCTCTAAAAACAGTTCTGATGCTAGCAGATCAGCTAATAAACAGAGTTGAATACATGCATTCCCGAGGTTTTCTTCACCGAGATATAAAGCCTGATAACTTCTTAATGGGTCTAGGCCGCAAAGCAAACCAGGTGTACATAATTGATTATGGCCTTGCGAAAAAGTATCGGGATCTCCAAACACATAAGCACATACCATACAGGGAAAACAAGAATCTAACTGGAACTGCTCGGTATGCAAGTGTTAACACCCACCTTGGCGTTGAACAAAGCAGAAGAGACGATCTAGAATCACTTGGATATGTGCTCATGTACTTCTTGAGAGGAAGTCTCCCATGGCAAGGCTTGAAAGCTGGCACTAAAAAGCAGAAATACGACAAGATCAGTGAAAAGAAGATGCTTACTCCAATAGAGGTCCTTTGCAAGTCATATCCTTCAGAGTTTACATCTTACTTTCACTACTGCCGATCATTGCGGTTTGATGACAAACCTGATTATGCATACCTAAAGAGACTCTTCCGCGACCTATTTATTAGAGAAGGTTATCAGTTTGATTATGTATTTGATTGGACTATATTAAAATATCCACAAATTGGATCAAGTTCCAGATCACGGCAGTCAAGTGGGAAGCAAGTTATAAACCAAGGACCATCTGCAGAGAGAGTAGAAAGGCCTTTAGTTGCACAAGAGCCTAGGGAACGACTCCCAGGTTCAGTTGAAGCATTTGCTAGAAGAAGTGGCTCTGGTCTGCTTAGTGATCATTCTAGGCACAGGTCTTCAGATGGTGCGCCCTCGTCCAAAGTAGCGCATCCTGATTCTGAGAGGACTCGTAGTTCTTCACGCACTGGTAGTGCCTCGAAAAGGCCTGTTGTATCAAGCAGCCGGCCAAGCTCCTCTGGTGAGCCTAGTGATAGCCGTGCTAGCAGATTAATGTCGAGCAGTGGCCGTCTATCAACCACTCAAAGGATTCAGCCTGGTTTTGAGTCCAAATCATCATCATTTACCCGTGCTACAACATCAAGAGGTGGCCGTGATGATGCAATAAGGAGCTTTGAGCTTCTGTCAATTGGCACAGGGAAAAGGAAATGA 1389 0.4392 MDRVIGGKFKLGRKIGSGSFGELYLGVNVQNGEEVGVKLEPVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRSRQSSGKQVINQGPSAERVERPLVAQEPRERLPGSVEAFARRSGSGLLSDHSRHRSSDGAPSSKVAHPDSERTRSSSRTGSASKRPVVSSSRPSSSGEPSDSRASRLMSSSGRLSTTQRIQPGFESKSSSFTRATTSRGGRDDAIRSFELLSIGTGKRK 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0444 462 Gene3D Transferase(Phosphotransferase) domain 1 1 334 - -
Lele22g0444 462 Pfam Protein kinase domain 10 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0444 462 MobiDBLite consensus disorder prediction 378 440 - -
Lele22g0444 462 FunFam Putative Casein kinase I 1 85 - -
Lele22g0444 462 MobiDBLite consensus disorder prediction 300 446 - -
Lele22g0444 462 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0444 462 FunFam Casein kinase 1-like protein 1 329 - -
Lele22g0444 462 MobiDBLite consensus disorder prediction 350 377 - -
Lele22g0444 462 PANTHER CASEIN KINASE-RELATED 13 366 - -
Lele22g0444 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Lele22g0444 462 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Lele22g0444 462 SMART serkin_6 9 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0444 462 MobiDBLite consensus disorder prediction 300 315 - -
Lele22g0444 462 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0444 Lele-ChrLele22 2749097 2753659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0444 8 213 MAP Kinase Kinase Kinase AT3G06030 25.000 1.58e-13 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Lele22g0444 Pkinase 3.5e-25 CL0016