Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0408 ATGCACTCAAAAATGATTTTGGAAGCCATGTTGTTCACAATGCTTTTATATCACCTGGTGCAGGATGAAATCTCAAGCCCCATTAGTCCTCGACTTTTCGAGCTTTGTGACGCTGAATTGTTCCCAGAGGCTCTGCAGAATCATGAGGTTACCTCCAGCTCAAACTGCTGCTATGAGGAGAATTCCTCCTATGCCCCAAATATATCTCTAGCTTTAGATGTAGACAACAATAAGTTCAACAATAGCAATACAATCACCACCCAAACTAGCACAAATCCGACTAGCACCGCCCCGGCTGCCGTTACTGCCACCACTAACGCCAACAACAATACAACCAATAGTACCAATCTGTCCATTATCTTTGACTCACAAGATGAAATTGACAATGACATTTCTGCTTCCATAGACTTCTCACCATCTCCTGCTTTTCCTGTCCCTCCATATCTCCCAGTCAAAAATCAACAAGATCAGCAATTTGATTTCTCTTCACTGCAGTCTCAGGTCACTACACTTGCAGCGAGTTCAGCTGTGGAAGGCCTTGAACAATACGCCATTGACTCTGCAGTTGCACCTCTTATGGGGGCTCCATTAGCTTCTGTTTTTGAAGACGATTTATCTTCTGTCCCTTCTTATGTGCCTTTGAACCCTTCATCTCCTTCTTGCTCTTATCTTAAGCCTGCTGGCATAGGACCTTACATGCCTCTAGGTCCCCTTAATACTGCCTTATCTGCTGATAGTTCTGGGATATTTGGTGGCAGCATTCTTCTGGGTTCTGAACTGCAGGCACAAGAACTGGATTACCAGGGAGATAATGGTGGATTTTATTGTCCAGATTCAATTCAAAGGGTTTTCAACCCTCCAGACCTCCAGGCACTTAGTGCTGAGAGCCAGCAACTTGTCGCTGGGGCTGCGAGTTCCACCACTTTGACCCCGGAAATATCAAACTTGGAGGATTCTACCTTCAAGGTTGGAAAGCTTTCTGTTGAACAGAGGAAAGAAAAGATTCATAGATACATGAAGAAAAGGAATGAGAGAAACTTCAGCAAGAAAATCAAGTATGCTTGTCGCAAAACTCTAGCAGATAGCCGGCCTCGGGTCAGAGGAAGGTTTGCAAAGAATGATGACTTTGGAGATACTCAAAGACCTGCTAGTAGCAATCATGAAGAAGACGATGAAGAAGACGTAGTTGTGAAGGAAGAAGGTGATATGGTTGATTCCTCAGATATTTTTGCTCATATCAGTGGAGTGAACTCCTTCAAATGCAACTATTCCATCCAGTCCTGGATTTGA 1290 0.4395 MHSKMILEAMLFTMLLYHLVQDEISSPISPRLFELCDAELFPEALQNHEVTSSSNCCYEENSSYAPNISLALDVDNNKFNNSNTITTQTSTNPTSTAPAAVTATTNANNNTTNSTNLSIIFDSQDEIDNDISASIDFSPSPAFPVPPYLPVKNQQDQQFDFSSLQSQVTTLAASSAVEGLEQYAIDSAVAPLMGAPLASVFEDDLSSVPSYVPLNPSSPSCSYLKPAGIGPYMPLGPLNTALSADSSGIFGGSILLGSELQAQELDYQGDNGGFYCPDSIQRVFNPPDLQALSAESQQLVAGAASSTTLTPEISNLEDSTFKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGDTQRPASSNHEEDDEEDVVVKEEGDMVDSSDIFAHISGVNSFKCNYSIQSWI 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0408 429 MobiDBLite consensus disorder prediction 366 395 - -
Lele22g0408 429 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 73 399 IPR045281 GO:0009909
Lele22g0408 429 MobiDBLite consensus disorder prediction 366 388 - -
Lele22g0408 429 Pfam CCT motif 331 373 IPR010402 GO:0005515
Lele22g0408 429 ProSiteProfiles CCT domain profile. 331 373 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0408 Lele-ChrLele22 2551189 2554766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0408 311 375 C2C2-CO-like Transcription Factor Family AT5G24930 41.538 7.40e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele22g0408 CCT 5.7e-19 CL0281