Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele22g0401 | ATGGCAGCTTCTGCAGCTGCGGCTATAGGCTCATCATTCTCTTCCTCCATCAACACTCTCAAGTGCCTTCGTTCATCCAAGAACTTGTCATCTGAACCCCTCCTCAGAATTTCATCAAACCGCGTGTTGGTGTATGGGTCACTATCGCACTTGTGGGAACCACTTTCCCTTGATACTAATGTCAACAAGTTGTGGGTTTCAAGGGTTTCGGCACAAGAAGAGCTTGTAGGGGTCGATGAGATTGATGCTGGTTTAGTTGAGGAGAATGAGGAGGGAGAAAAGGAAGTGGTAGAAGAAGAAGGAGAGGCTGAAGAAGTCTCTGTCAACACTAAGCTTTATTTTGGGAACTTGCCTTACAGTGTTGATAGTGCACAACTTGCAGCGATTATTCAGGATTATGCCAGCCCAGAACTCATTGAGGTTCTTTACCACAGAGAGACTGGAAAAAGCAGAGGTTTTGCATTTGTTACAATGAGTAGTGTCGAAGATTGCAATGCAGTGATAGAAAACCTTGATGGAACTGAATACTTGGGTAGAACCCTGCGAGTGAACTTCTCTGACAAACCTAAACCGAAAGAACCGTTGTACCCTGAAACTGAACATAAGCTTTTTGTTGGGAACTTGTCATGGTCTGTAACTTCTGAGAGTCTGACAGAAGCTTTTCAAGAATATGGACATGTGGTTGGCTCTAGAGTGTTATATGATGGGGAAACAGGAAGATCCCGTGGTTATGGCTTTGTTTGCTATTCAACCAAAGCAGAAATGGAAACTGCCCTTTCATCCATGAATGGAGTGGAACTTGAAGGACGGGCAATGCGTGTAAGCTTGGCTGAAGGGAAACGATCATAA | 849 | 0.4441 | MAASAAAAIGSSFSSSINTLKCLRSSKNLSSEPLLRISSNRVLVYGSLSHLWEPLSLDTNVNKLWVSRVSAQEELVGVDEIDAGLVEENEEGEKEVVEEEGEAEEVSVNTKLYFGNLPYSVDSAQLAAIIQDYASPELIEVLYHRETGKSRGFAFVTMSSVEDCNAVIENLDGTEYLGRTLRVNFSDKPKPKEPLYPETEHKLFVGNLSWSVTSESLTEAFQEYGHVVGSRVLYDGETGRSRGYGFVCYSTKAEMETALSSMNGVELEGRAMRVSLAEGKRS | 282 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele22g0401 | 282 | FunFam | 31 kDa ribonucleoprotein, chloroplastic | 71 | 191 | - | - | |
Lele22g0401 | 282 | Gene3D | - | 70 | 191 | IPR012677 | - | |
Lele22g0401 | 282 | FunFam | 28 kDa ribonucleoprotein, chloroplastic | 192 | 282 | - | - | |
Lele22g0401 | 282 | Gene3D | - | 192 | 282 | IPR012677 | - | |
Lele22g0401 | 282 | SUPERFAMILY | RNA-binding domain, RBD | 196 | 281 | IPR035979 | GO:0003676 | |
Lele22g0401 | 282 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 203 | 272 | IPR000504 | GO:0003723 | |
Lele22g0401 | 282 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 112 | 182 | IPR000504 | GO:0003723 | |
Lele22g0401 | 282 | SMART | rrm1_1 | 202 | 275 | IPR000504 | GO:0003723 | |
Lele22g0401 | 282 | SMART | rrm1_1 | 111 | 184 | IPR000504 | GO:0003723 | |
Lele22g0401 | 282 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 110 | 188 | IPR000504 | GO:0003723 | |
Lele22g0401 | 282 | PANTHER | OS02G0815200 PROTEIN | 53 | 280 | - | - | |
Lele22g0401 | 282 | Coils | Coil | 89 | 109 | - | - | |
Lele22g0401 | 282 | SUPERFAMILY | RNA-binding domain, RBD | 106 | 194 | IPR035979 | GO:0003676 | |
Lele22g0401 | 282 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 201 | 279 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele22g0401 | Lele-ChrLele22 | 2513666 | 2515810 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele22g0401 | 110 | 280 | Eukaryotic Initiation Factors Gene Family | AT3G16380 | 30.645 | 1.43e-16 | 77.8 |