Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0397 ATGACTCTGGGTGTACTAGGTGGTGCCGGCCATGGTGGCTCTCCTGGGGCTACCCCAAATGAGCCTGCTGTGTCCAATGCTAAGGTTCTGGGTCAAGAATGCTCATCATCGTACAAAGGTGAGGCTGAACTTGAACTGGGTTTGGGTCTGAGCCTCTGTGGTCGACGCGGTGGTGGTGTTGGGAAGGCCAAGCCTTCTTCTGCATGGGGCGAGTGTGGTCGTATTTTGACAGCTAAAGACTTCGCTTCTGGAGTCTCTCATGGACCTTCTGTTGCTGCTTCTCGTTTCTCAGACAGAGTCAGCACTGTGGGTGGTTCTGTTTCTGGCACTAAAAGAGCTGCTGACTCTGTTTCTCATGATGCTGGATCTCCTACTGCTGCCAGCCAAGTTGTTGGGTGGCCACCCATCAGGGCATATAGGATGAACAGCTTGATTAACCAAGCAAAGGCTCAAAGGGCTGAAGAAGATAAATCCGGCGTCGCCGATAAGAATAATCCTGATGATGTTTCAGTTACTAAAACTGGCACTGTCAACAATACTGAGAAAAACCATCTCGGATTTGTGAAGGTGAACATGGATGGAATTCGCATTGGGAGAAAAGTAGACTTGAATTCTCATTCAAGCTATGAAACTTTAGCTCGAACACTTGAAGAAATGTTTTTCAGGCCTGCTTCAGCTGCTAAATCAGCAGCCGGTAGAGAGAAAGAGGCTGGAACGAAACTCTCTAAGCTTTTGGATGAAACATCTGAATTTGTGCTGACATATGAAGATAAAGAAGGTGATTGGATGCTTGTGGGAGATGTTCCTTGGAGGATGTTCCTCAGCTCAGTGAGAAGGCTCCGAATCATGAGAACATCGGAAGCCAATGGACTTGCTCCTAGATATCAAGAGCAAAATGAGAAGCTTAGGATTAAACCCATTTAG 924 0.4719 MTLGVLGGAGHGGSPGATPNEPAVSNAKVLGQECSSSYKGEAELELGLGLSLCGRRGGGVGKAKPSSAWGECGRILTAKDFASGVSHGPSVAASRFSDRVSTVGGSVSGTKRAADSVSHDAGSPTAASQVVGWPPIRAYRMNSLINQAKAQRAEEDKSGVADKNNPDDVSVTKTGTVNNTEKNHLGFVKVNMDGIRIGRKVDLNSHSSYETLARTLEEMFFRPASAAKSAAGREKEAGTKLSKLLDETSEFVLTYEDKEGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRYQEQNEKLRIKPI 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0397 307 SUPERFAMILY CAD & PB1 domains 186 283 - -
Lele22g0397 307 Pfam AUX/IAA family 91 294 IPR033389 -
Lele22g0397 307 MobiDBLite consensus disorder prediction 1 23 - -
Lele22g0397 307 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 43 290 IPR003311 GO:0005634|GO:0006355
Lele22g0397 307 Gene3D - 179 296 - -
Lele22g0397 307 MobiDBLite consensus disorder prediction 105 128 - -
Lele22g0397 307 FunFam Auxin-responsive protein 180 295 - -
Lele22g0397 307 ProSiteProfiles PB1 domain profile. 185 287 IPR000270 GO:0005515
Lele22g0397 307 MobiDBLite consensus disorder prediction 149 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0397 Lele-ChrLele22 2495224 2497443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0397 188 294 B3 DNA Binding Superfamily AT1G59750 34.579 1.71e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele22g0397 AUX_IAA 1.2e-64 CL0072