Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0384 ATGGCTAGCTTCATGATTACCTCTATGTTCTGTTTCCTGTTTGTTGTGCCTCTTCCTTCTTCTTCTTCTCGTGATGGAGGAGGTGTAATAGTATCCAAGGATGGGTATGGAGATTATGCGAGTATCAGTGAAGCCATAGAGGGAGCTCCAAGCTTCAGCAGAGAGAGATACAGAATAGAGGTCAAAGGTGGGATCTACGAGGAGTATCTCAGAATTCCCTCCGACAAGACCAACATTATGCTCATCGGAAGCGGCAGCCAGATTACGAGGATTACTGGCAATCGAAACGCTGCCACCGATCAAAGTGCCACCGTAGCGATATATGGATCAGGGTTCGTCGCCGAAAACCTAGCGTTTGTGAACACCGCAGGGAGCAACGCCGGCCCAGGAGTGGCCGTATTCAACCAGGCCGATCACAGCGCTTTCTACAGATGCTCCATCGAAGGCTTCCAAGACACACTATGGGCCGTCTCCGGCCGCCAATTCTACCGAGACTGCGACATCTACGGCACTGTCGACTTCATCATGGGCAACGCCGCCGCCCTCTTCCAGAACTGCAACCTCTTCGCCAGACCCAAGGACTTTGTGACCTTCACGGCCCAGTCTCGCTCCTCCTACAGTGAAGCCACGGGCTTCGTCTTCCAGTTCTGCCACTTCGCCATGTCGGCGGAGGACGCAGATCGGAAGTCGGAGGTCATCAGGGCGACGTTAGGGAGGCCATGGAGGGCGTATTCGAGGGTGGTGATAATGGAATCGTTCATCGATTCACTGATCGATCCGAAAGGATGGGAAATTATGTACGGAACGGCGCGTACGGATATGTTGAGTTACATAGAGTATAAGAATGAAGGTCCAGGGGCGAAGACTGATGAGAGGGTGAAGTGGCCTGGGGTTAGGGTTGTCGATGATCCCAAGGAAGTTGAAGGCTTCACTGCTCCTGCGTTTCTTGATGACGATGCCTGGATTCTTCAGCTCCGGATTCCATATCATCCAGTCAGTGAAGAAAGCATTTCTGGCCCTCTTAAGTGGATTGTGGGATCTATTGCCATGGTTCCCTTACTTACGGGCTCTATCTTTTGCTATCAAACACAGCCACTAAACCTTGATCCTTCAGTATTTGGGTTGTCTCGCGTGATTGGCCAGTTGATGCTTCTATCAGGGACTGTTCTCTATGATCGCTATTGGAAAAAAGTTCCAATGAGAAAACTGATAGGGATAGTACAAATTTGTTATGCTGCATCTCTACTTCTTGATCTGGTTCTAGTAAATCAGATAAATCTTAGACTGGGAATTCCCAATGGAGTGTTTGCCCTTTGCTTCTCTGGTATTGCAGAAACTTTAGCACAATTTAAGCTCCTTCCTTTTTCAATGTTTTTCGCAAGTGTAGGTCCACAGGGTTGTGAAGGGTCTCTTATGTCTTTCTTTGCATCGGCTGTATGTCTGTCGTCGATAGTCAGCAGTTTTTCGGGTGTCGGATTGGCTTCTCTGCTTGGTATTACTTCTGGTGATTACTCAGGCTTGACCATGGGAATTCTGATACAATTCGTCGCAGCTCTTGTTCCGTTGAGATGGATTCATTCTGTACCTATGTCTAAACCTATTGTTGAGAAGGGAAGGAGGAGAAGAGGTATGAATAGAAGAAATCAGAAACATAGAAGAGTTGGAAAAGTTGTTCTTGGTTCTACTTATGCCTATCGGCGTGAAAGAGAATAA 1713 0.4804 MASFMITSMFCFLFVVPLPSSSSRDGGGVIVSKDGYGDYASISEAIEGAPSFSRERYRIEVKGGIYEEYLRIPSDKTNIMLIGSGSQITRITGNRNAATDQSATVAIYGSGFVAENLAFVNTAGSNAGPGVAVFNQADHSAFYRCSIEGFQDTLWAVSGRQFYRDCDIYGTVDFIMGNAAALFQNCNLFARPKDFVTFTAQSRSSYSEATGFVFQFCHFAMSAEDADRKSEVIRATLGRPWRAYSRVVIMESFIDSLIDPKGWEIMYGTARTDMLSYIEYKNEGPGAKTDERVKWPGVRVVDDPKEVEGFTAPAFLDDDAWILQLRIPYHPVSEESISGPLKWIVGSIAMVPLLTGSIFCYQTQPLNLDPSVFGLSRVIGQLMLLSGTVLYDRYWKKVPMRKLIGIVQICYAASLLLDLVLVNQINLRLGIPNGVFALCFSGIAETLAQFKLLPFSMFFASVGPQGCEGSLMSFFASAVCLSSIVSSFSGVGLASLLGITSGDYSGLTMGILIQFVAALVPLRWIHSVPMSKPIVEKGRRRRGMNRRNQKHRRVGKVVLGSTYAYRRERE 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0384 570 FunFam Pectinesterase 4 27 332 - -
Lele22g0384 570 Gene3D - 27 332 IPR012334 -
Lele22g0384 570 SUPERFAMILY Pectin lyase-like 29 329 IPR011050 -
Lele22g0384 570 Pfam BT1 family 359 537 IPR039309 -
Lele22g0384 570 TIGRFAM fbt: folate/biopterin transporter 334 548 IPR004324 GO:0016020
Lele22g0384 570 PANTHER PECTINESTERASE 29 322 - -
Lele22g0384 570 SUPERFAMILY MFS general substrate transporter 360 524 IPR036259 -
Lele22g0384 570 Pfam Pectinesterase 29 318 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0384 Lele-ChrLele22 2412191 2418199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0384 29 329 Carbohydrate Esterase AT2G26440 45.779 1.40e-85 274