Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0383 ATGCTTAGGAGAAGTAGATGGATAAAGATAAGTGTGTCAGTTACAGTGTCCATTGATGGCCACGGAGATTACACCACAATTGGCCAAGCCATAGCCGCAGCTCCTTCCTTCAGCGACACAAGATACATCATCCTCGTCCGACCCGGAATCTACGAGGAGCATCTCCACATTCCCCATAACAAAACCAACATTCTTCTAATCGGTGAGGGCCGCCATAATACTATCATTATCGGACACAACAATGGCGGCACCTTGTCTCGAACAGCCACAGTAGCAATTCACGGAGCGGGCTTTGTGGGCCGAGATATAGCCTTTGTGAATTCGGCTGGGCCGAAATCAGGCCCTGGAATAGCTCTATTCAACACGGCGGACAGGTCGGTGTTGTACAATTGCTCCGTCGAGGGCTTTCAAGACACCTTGTGGGCTACATCGGGCCGTCAATTTTACCGGGAATGCCACATCTACGGCTCCGTCGACTTCGTCATGGGAAATGCCGCCGCCGTTTTCCAGAAATGCGTGCTCTACGCCCGCCTCACCGGCTACTCCGTTTTCACCGCCCAGTCTCGGGACGACCCTCTGCAACTCACCGGTTTTGTTTTTCATTACTGTCGTTTTACGGTGTCTCAGGAGGATGCTGGGAAGGAGTTATCTGGTGCTGGAAAGGCTATTTTAGGACGGCCGTGGAGGGCGTATTCGAGGGTGGTGATCATGCGGTCGTATATTGATGATATAGTGAGTCCGATGGGGTGGGGAGAGATGGAGGGGACGCCGACCGACAAAGTGACTTACGTGGAGTTTGAGAATAAAGGGCCTCGATCGAGTACACTTGGCAGAGTGAGGTGGATTGGGGTTGTGGAGGTGCACGATAAGGATCAGGTGATGGACTTCACTCTGTCGAGATTCATAGAAGGGGATGATTGGATCCCTCCAACGGGGGTTCCATACAATAGAGGATTATAA 960 0.5188 MLRRSRWIKISVSVTVSIDGHGDYTTIGQAIAAAPSFSDTRYIILVRPGIYEEHLHIPHNKTNILLIGEGRHNTIIIGHNNGGTLSRTATVAIHGAGFVGRDIAFVNSAGPKSGPGIALFNTADRSVLYNCSVEGFQDTLWATSGRQFYRECHIYGSVDFVMGNAAAVFQKCVLYARLTGYSVFTAQSRDDPLQLTGFVFHYCRFTVSQEDAGKELSGAGKAILGRPWRAYSRVVIMRSYIDDIVSPMGWGEMEGTPTDKVTYVEFENKGPRSSTLGRVRWIGVVEVHDKDQVMDFTLSRFIEGDDWIPPTGVPYNRGL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0383 319 FunFam Pectinesterase 4 10 319 - -
Lele22g0383 319 SUPERFAMILY Pectin lyase-like 11 317 IPR011050 -
Lele22g0383 319 Gene3D - 7 319 IPR012334 -
Lele22g0383 319 Pfam Pectinesterase 14 305 IPR000070 GO:0030599|GO:0042545
Lele22g0383 319 PANTHER PECTINESTERASE 12 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0383 Lele-ChrLele22 2406959 2409290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0383 13 319 Carbohydrate Esterase AT3G05620 44.268 7.36e-84 261