Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0375 ATGAGGATTCGGGAATCTGTTTTGATTAATTCTAAAAATGCTATGGTCATCAGGATACTGATCTCATGTATAAACTCAGTTTCTTACACTTCTACTTCAATCAATTTCAGAGTTGGAACTCAAGTTTTTGTTGAGGACCCTGAGGCAGCTTGGATAGATGGAGAAATTGTGGAAACTAATGGCGAAGAGATCAAAGTTAAATCCGCATCAGAGAAGACGGTTGTGGTCAAAGCATCCAATGTCCATCCCAAGGATCCTGAGTTCCCTACTTCTGGTGTGGATGACATGACAAGGCTGGCATATCTGCATGAGCCGGGGGTTCTCCAGAATTTGCAAATTCGATATGACACCAACGAAATATATACATACACAGGAAATATATTGATTGCTGTGAACCCTTTTCAAAGATTACCTCATCTGTATGGCCACGATGTCATGGATAAGTATAAAGGATCAGCGATTGGTGAATTGACCCCACATCCTTTTGCAATTGCTGATTCTGCATATAGGATGATGTTACATGAAGGAACAAGCCAATCAATTTTGGTTAGTGGTGAAAGTGGAGCCGGCAAAACAGAGAGCACAAAGATGCTTATGCATTATCTTGCCTTTATGGGTGGGAGAAAGGAATCTGAGGGACGATCTGTGGAGCAGCAAGTTCTTGAGTCCAATCCAGTTTTAGAAGCATTTGGCAATGCAAAGACAGTTAGAAACAATAATTCAAGTCGATTTGGGAAGTTTGTGGAGCTACAGTTTGATCACAGGGGGAGAATTTCAGGAGCTGCTATTAGAACTTATTTGCTGGAAAGATCCCGTGTCTGTCAAGTTTCAGACCCTGAGAGAAACTACCATTGTTTTTATATGATTTGTGCTGCACCAGAAGAGGATATTAAAAAGTTTAAATTGGGAAATCCAAGAACTTATCATTACCTAAACCAATCAAATTTCTTCGAATTGGATGGATTGGATGAATCCAAGGAGTACCTTGCAACTAGGAGAGCTATGGAGGTTGTTGGCATCACTTCTGATGAGCAGGATGCTATATTCAGAATAGTAGCTGCAATTCTGCACTTAGGAAACATTGAATTTCAGAAGGGTGATGAGCCGGATTCCTCTGAACCCAAGGATGATCAATCTCGTCTCCACCTAAAAACTACAGCTGAACTTTTAATGTGCGACGACAAATCGCTTGAGGACTGCTTGTGCAAACGTGTTATGGTAACACGTGGTGAGGCCATAACAAAATGGCTTGATCCAAATTCGGCAGCTCTCAGTAGAGATTCATTGGCCAAAATAGTTTACTCAAAGCTGTTTGACTGGATCGTGAATAGGATTAATAACTCTATCGGTCAAGATCCAAATTCGAAGAACTTAATTGGGGTCCTGGATATATATGGATTTGAGAGTTTCAAGACAAACAGTTTTGAGCAATTTTGCATCAACCTGACAAATGAGAAATTACAGCAACATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAGGAATATACAAAGGAAGAGATTAACTGGAGTTATATAGAGTTCATTGATAATCAGGACGTCCTTGATCTCATCGAGAAGAAACCTGGCGGCATCGTTGCTCTTCTTGATGAGGCCTGCATGTTTCCAAGATCGACACACGAAACATTTGCCGAAAAGTTATATCAGACTTTTAAAGACAATAAACGCTTCAGCAAACCAAAGTTGTCTCGAACTGATTTCACCATCTGCCACTATGCCGGTGATGTCACTTATCAGACTGACTTTTTCCTTGACAAGAACAAAGACTACGTTGTTCCAGAGTTCGAGGCACTACTCAACGCTTCAAAGTGCTCCTTTGTTTCAGCATTGTTTCCACCTCCACCTGAGGAAACTTCCAAATCATCAAAGTTCTCATCAATAGCCACCCAGTTTAAGCAACAACTACAATCTTTGCTTGAAACGCTGAATGCTACTGAGCCACATTACATTCGTTGCATAAAGCCGAATAATCTTCTCAAGCCAAGGATATTTGAGAACACTAATGTGTTACAGCAGCTTCAATGTGGGGGAGTAATGGAGGCAATTCGGATAAGTTGTGCTGGATACCCAACTAGGAAGCAGTTTGATGAATTTGTTAAGCGGTTTCTAGTTCTGTCACCTGATGCTCTGAAAGGATGCCCTGATGAGAGGACAGCTTGCGTGAAGCTGCTAGGACAAGTAAATCTTGAAGATTATCAGGTGGGCAAGACTAAAGTATTTCTGAGAGCAGGACAGATGGCAAAACTAGATTCATGTCGTGCTGAGGTCTTAGGACGTTCTGCAACCATTATTCAGAGTAAAATCCGCTCATTTTTTTGTCACAAAAAATACGTTCTGTTGCGGTTGTCTGCCATACAAATACAAACAATCTGTAGAGGAGAACTCGCACGCTGTCTGTGCGAGAAAATGAGGAGGGAAGCTGCTTCTATAAAAATTCAAAAGAATGGTCGCATGTATATTGCTAAAACATCTTATAAAACTTTGCGCGCCTCTGCCATTTCCATCCAAACCGGCATGCGATGCATGGCTGCTAGAAATGAGCTCAAGTGCAGAAGGCGGACGGAAGCTACAACTGTCATCCAAAGTCACTGCCGAGGTTATACAGCCTACATCCAACTCCTGAGGCTAAGGGAAGCAGCAATCATTATACAGTGTGCCTCGAGGGGACAAAGGGCTCGTAAAGAACTTCGAATGCTTCAAATGGCTGCTAGGGAAACTGGTGCTCTCAAAGCTGCCAAAGAAAAACTTGAAAAGGAAGTTGAAGAATTAAATTCTTCTCTACAAATGGAGAAGAAGATGATGGCTGATGTTGAACAGGAAAACACAAAATTGCAATCTGCCTTGGAAAAGACAAAGGAGGAAAATTCAAAATTGCAATCTGCTTTGGAAGAGATTAAGGATGAAAATGCAAAACTGCAAACTTCCTTGGAAGAGACTAAGGCATTGCTCTTTCAGGAGCGCCATGTAGCAAAAAATGTGGGCACTGGTTAA 3012 0.4147 MRIRESVLINSKNAMVIRILISCINSVSYTSTSINFRVGTQVFVEDPEAAWIDGEIVETNGEEIKVKSASEKTVVVKASNVHPKDPEFPTSGVDDMTRLAYLHEPGVLQNLQIRYDTNEIYTYTGNILIAVNPFQRLPHLYGHDVMDKYKGSAIGELTPHPFAIADSAYRMMLHEGTSQSILVSGESGAGKTESTKMLMHYLAFMGGRKESEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDHRGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMICAAPEEDIKKFKLGNPRTYHYLNQSNFFELDGLDESKEYLATRRAMEVVGITSDEQDAIFRIVAAILHLGNIEFQKGDEPDSSEPKDDQSRLHLKTTAELLMCDDKSLEDCLCKRVMVTRGEAITKWLDPNSAALSRDSLAKIVYSKLFDWIVNRINNSIGQDPNSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFIDNQDVLDLIEKKPGGIVALLDEACMFPRSTHETFAEKLYQTFKDNKRFSKPKLSRTDFTICHYAGDVTYQTDFFLDKNKDYVVPEFEALLNASKCSFVSALFPPPPEETSKSSKFSSIATQFKQQLQSLLETLNATEPHYIRCIKPNNLLKPRIFENTNVLQQLQCGGVMEAIRISCAGYPTRKQFDEFVKRFLVLSPDALKGCPDERTACVKLLGQVNLEDYQVGKTKVFLRAGQMAKLDSCRAEVLGRSATIIQSKIRSFFCHKKYVLLRLSAIQIQTICRGELARCLCEKMRREAASIKIQKNGRMYIAKTSYKTLRASAISIQTGMRCMAARNELKCRRRTEATTVIQSHCRGYTAYIQLLRLREAAIIIQCASRGQRARKELRMLQMAARETGALKAAKEKLEKEVEELNSSLQMEKKMMADVEQENTKLQSALEKTKEENSKLQSALEEIKDENAKLQTSLEETKALLFQERHVAKNVGTG 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0375 1003 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 814 912 IPR027417 -
Lele22g0375 1003 ProSiteProfiles Myosin motor domain profile. 91 761 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele22g0375 1003 Pfam Myosin head (motor domain) 93 749 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele22g0375 1003 SMART iq_5 859 881 IPR000048 GO:0005515
Lele22g0375 1003 SMART iq_5 882 904 IPR000048 GO:0005515
Lele22g0375 1003 SMART iq_5 763 785 IPR000048 GO:0005515
Lele22g0375 1003 SMART iq_5 786 808 IPR000048 GO:0005515
Lele22g0375 1003 SMART iq_5 834 856 IPR000048 GO:0005515
Lele22g0375 1003 SMART iq_5 811 833 IPR000048 GO:0005515
Lele22g0375 1003 Pfam IQ calmodulin-binding motif 884 904 IPR000048 GO:0005515
Lele22g0375 1003 Pfam IQ calmodulin-binding motif 861 876 IPR000048 GO:0005515
Lele22g0375 1003 Pfam IQ calmodulin-binding motif 790 806 IPR000048 GO:0005515
Lele22g0375 1003 Pfam IQ calmodulin-binding motif 766 784 IPR000048 GO:0005515
Lele22g0375 1003 Pfam IQ calmodulin-binding motif 814 833 IPR000048 GO:0005515
Lele22g0375 1003 Gene3D - 695 762 - -
Lele22g0375 1003 FunFam Class V myosin 468 612 - -
Lele22g0375 1003 Gene3D - 40 84 IPR008989 GO:0003774|GO:0005524|GO:0051015
Lele22g0375 1003 Coils Coil 906 989 - -
Lele22g0375 1003 CDD MYSc_Myo11 105 749 IPR036018 -
Lele22g0375 1003 ProSiteProfiles IQ motif profile. 835 864 IPR000048 GO:0005515
Lele22g0375 1003 ProSiteProfiles IQ motif profile. 812 841 IPR000048 GO:0005515
Lele22g0375 1003 Gene3D - 281 339 - -
Lele22g0375 1003 FunFam Myosin heavy chain 281 336 - -
Lele22g0375 1003 PANTHER MYOSIN 83 973 - -
Lele22g0375 1003 Pfam Myosin N-terminal SH3-like domain 39 81 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lele22g0375 1003 Gene3D Kinesin motor domain 94 691 IPR036961 -
Lele22g0375 1003 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 815 IPR027417 -
Lele22g0375 1003 Gene3D - 862 911 - -
Lele22g0375 1003 Gene3D - 814 861 - -
Lele22g0375 1003 Gene3D - 764 813 - -
Lele22g0375 1003 ProSiteProfiles IQ motif profile. 787 816 IPR000048 GO:0005515
Lele22g0375 1003 PRINTS Myosin heavy chain signature 511 539 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele22g0375 1003 PRINTS Myosin heavy chain signature 121 140 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele22g0375 1003 PRINTS Myosin heavy chain signature 458 486 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele22g0375 1003 PRINTS Myosin heavy chain signature 178 203 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele22g0375 1003 PRINTS Myosin heavy chain signature 225 252 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele22g0375 1003 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 37 86 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lele22g0375 1003 ProSiteProfiles IQ motif profile. 883 912 IPR000048 GO:0005515
Lele22g0375 1003 SMART MYSc_2a 85 762 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele22g0375 1003 Gene3D - 468 652 - -
Lele22g0375 1003 FunFam Myosin 2 341 458 - -
Lele22g0375 1003 FunFam unconventional myosin-Va 814 862 - -
Lele22g0375 1003 Gene3D Myosin VI head, motor domain, U50 subdomain 341 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0375 Lele-ChrLele22 2344191 2355446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0375 33 1001 Myosins gene family AT5G43900 70.279 0.0 1436