Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0359 ATGAGTCGTGGTGGTTCATCATCATCGTCATCGTCAAGATGGTGCCCAACCCAGGAGCAGCTTGTGATTCTTGAGGAGATGTACAGAGATGGGATCAGGACTCCAAATGCGTCGCAGATTCAGCATATCACGGCTCAACTCTCTTTCTATGGCAAGATAGAGGGCAAGAATGTTTTCTATTGGTTTCAGAACCACAAGGCTCGGGACCGCCAGAAACTCCGCCGCAGATTGAACAAGCAACTTCAGTTACAGAAGCAGCAGCAGCAACACCACCTCTGTAACTATTATTACCTTCACCTTCATCTGAATCACAACTATAACAGTCACCATTCTCACTCTCTTATTACTGCTGCCTCATCTTCCGAACAACATTCCTTTTACAACTCCCTTGCTTCGTTTTCACAGGGAGGAGCTGGCGAAACATCAAAACAAGGCATAGATTACAAATGGAAAATTGAGAACACAGAAGGAGTGATGGAGAAGACATTGAAGCAAGATTGGAGGAGGAGGACGACGATGGAAGTAAGTAGTCCAGGTGCTTCGTATTGGCCTACAAGAACCCTCAAGACTCTAGAACTTTTCCCAATCAGGGACAGACTCAAAAAAGGATGA 612 0.4559 MSRGGSSSSSSSRWCPTQEQLVILEEMYRDGIRTPNASQIQHITAQLSFYGKIEGKNVFYWFQNHKARDRQKLRRRLNKQLQLQKQQQQHHLCNYYYLHLHLNHNYNSHHSHSLITAASSSEQHSFYNSLASFSQGGAGETSKQGIDYKWKIENTEGVMEKTLKQDWRRRTTMEVSSPGASYWPTRTLKTLELFPIRDRLKKG 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0359 203 Gene3D - 5 72 - -
Lele22g0359 203 ProSiteProfiles 'Homeobox' domain profile. 7 72 IPR001356 GO:0003677
Lele22g0359 203 CDD homeodomain 17 72 IPR001356 GO:0003677
Lele22g0359 203 Pfam Homeodomain 11 71 IPR001356 GO:0003677
Lele22g0359 203 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 6 198 IPR044555 GO:0003700|GO:0099402
Lele22g0359 203 FunFam WUSCHEL-related homeobox 4 11 78 - -
Lele22g0359 203 SUPERFAMILY Homeodomain-like 6 74 IPR009057 -
Lele22g0359 203 SMART HOX_1 9 76 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0359 Lele-ChrLele22 2229066 2229841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0359 7 79 Wox Gene Family AT2G28610 79.452 3.25e-39 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele22g0359 Homeodomain 5.4e-18 CL0123