Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0356 ATGGAGTTGGGGATTTACCTGCAAGGTTTATCTTGGGACGATTGTGGTGAAATCCGTGCCAGTTACCGCAGTGCTATACTCAATTTACATCCTGATAAATTATTGAAGACGTCTGAGATGTCAAGCAGTCGTCAAACACCAGGAGATAGATTCCTCACTGTACAGAAGGCGTGGGAAATTCTCAGCAATTCAACCTCCCGTTCAATATACGACAACGAGCTGCGTGGTTCAAGACAGGATGCATTGGCTGCAGATGTTGCAGAAGATATAAGCTTGCAGGATACGATCGTTGAACAAGACGGAGAAGCATTGGATCTCTCTTACCAGTGCAGATGCGGCGATTACTTCGCCATAGACTCTACAGAATTGGAGAAAATGGGGTATTCATTGTTGAGGGATGGTAGTGAGATTTCTGTACGTAGCGATGATAGTTTGCCAGGTTCTGTGATTCTTCCGGGTGGATCTTGTTCTCTGAAAGTTCGTCTAGTAATCAACATGGATGATAGCAACTGA 513 0.4464 MELGIYLQGLSWDDCGEIRASYRSAILNLHPDKLLKTSEMSSSRQTPGDRFLTVQKAWEILSNSTSRSIYDNELRGSRQDALAADVAEDISLQDTIVEQDGEALDLSYQCRCGDYFAIDSTELEKMGYSLLRDGSEISVRSDDSLPGSVILPGGSCSLKVRLVINMDDSN 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0356 170 SUPERFAMILY CSL zinc finger 87 168 IPR036671 -
Lele22g0356 170 ProSiteProfiles dnaJ domain profile. 1 74 IPR001623 -
Lele22g0356 170 Pfam DnaJ domain 17 71 IPR001623 -
Lele22g0356 170 CDD DnaJ 17 63 IPR001623 -
Lele22g0356 170 Pfam CSL zinc finger 89 163 IPR007872 -
Lele22g0356 170 PANTHER DPH3 HOMOLOG-RELATED 16 168 IPR044248 GO:0017183|GO:0046872
Lele22g0356 170 Gene3D DnaJ domain 11 78 IPR036869 -
Lele22g0356 170 FunFam DNAJ heat shock N-terminal domain-containing protein-like 80 168 - -
Lele22g0356 170 Gene3D DPH Zinc finger 79 170 IPR036671 -
Lele22g0356 170 SUPERFAMILY Chaperone J-domain 14 75 IPR036869 -
Lele22g0356 170 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 86 165 IPR007872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0356 Lele-ChrLele22 2220511 2221023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0356 17 85 C2H2 Transcription Factor Family AT1G74250 39.130 6.20e-06 43.5