Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0352 ATGGACCACTTGGCATTTTCACGAGTCTTCTGCATGTTCGATGCTGACGTGTCAATGCATGGTTTGCTTGGGATTCAGCCCAAGAAGGGTAACTCACCCTCATCACTACCCTCTTCACATTTCTCTAACTGGAACATTCGTGACAGAAACCCATGCAATTGGACCTCCATAACTTGTTCTCGTCGAGGTTTCGTCACGAAAATTAATGTTGTTTCTGTCCCTCTGGACTTTCCTCTACCTTCCAATCTCTCGTCCTTTCGCTTCCTCAGAAAACTTGTCATACCAAACGCAAATCTCACCGGAACCATCGCTTCCGATATCGGTGCTTGTTCCTCCCTTACCGTCATTTATCTTAGCCATAATAGTCTCACTGGTTCTATTCCTGCAAGTGTTGGGAATTTACCAAATCTCAGGATTTTGGCCTTAAACTCCAACTTCCTCAGTGGAGAAATCCCAAATGAGCTAAGTTATTGCATTGGCCTGAAATCTCTCTTCCTTTCAAATAATCAGCTGGGTGGGACTATCCCATCTTCGCTGGGAAAATTATCAAAACTTGAGCATTTTAGAGCAGGAGGGAACATTAACATTACTGGGAATATACCACATGAGCTGGGAAATTGCATTAGTTTGATTTCTTTGGGGTTGACTGAAACCAGCATATCAGGCTCTTTGCCAGCTTCGTTTGGGAGGCTGAAGAAGCTTCAAAGGCTGTCCATTTGTTCTATTTCATCTGATATTGGGAGGCTTCAGAAGCTACAGATTTTGAGTTTATGGGATAATTCTGTTGTTGGGGATATTCCTAAAGAGATTGGTAACTGCACAAGCTTGAGAACGCTTGAGCTTTCTTTGAATTCTTTATCTGGGACTATCTCTTTGTCTGTGGGTAATCTTATGAAGATTACCCACATGGAGACAATAATAATGGTACTCAGAAGCTTGAAAGACGAAAATATAATAGGAAAAGGATGCTCAGGAGTTGTGCATCGTGTTGATATTGGTAATAATGAAGCCATAGCCGTGAAGAAACTGAGGACGCCAGCTCCAATGGTTTCAGGTGATGGTGGACCCAATAATGATGACTCTTTCTCGAGAGAGCTGAGAATCCTAGGTTTAATCCGACATAGGAACATTAGGGATGAAGAAAATTCTTGTCTGGAATGGGGAGTGAGGTACAAAATCTTATTGGGTGCTGCACAAGGCCTCGAATATCTTCATCATGATACAGAACCTCCAATAGTTCACAGAGACATCAAAACCAGTAACATCCTCATTGGCCCTGAATTTGATGCTTGCATTGCTGATTTTGGCTTGGCCGAGTTTGTTGACGATTGTGGTTTCGGCAACTCCCCCAGTGCAGTCGCTGGTTCTTGGGGATATATTGCTCCTGCTCAGTATATACTTGAATATGCATTAATTATTGTTTTTCCTTATCTCCAATTACCTTCTTCATTGAAGTAA 1458 0.4232 MDHLAFSRVFCMFDADVSMHGLLGIQPKKGNSPSSLPSSHFSNWNIRDRNPCNWTSITCSRRGFVTKINVVSVPLDFPLPSNLSSFRFLRKLVIPNANLTGTIASDIGACSSLTVIYLSHNSLTGSIPASVGNLPNLRILALNSNFLSGEIPNELSYCIGLKSLFLSNNQLGGTIPSSLGKLSKLEHFRAGGNINITGNIPHELGNCISLISLGLTETSISGSLPASFGRLKKLQRLSICSISSDIGRLQKLQILSLWDNSVVGDIPKEIGNCTSLRTLELSLNSLSGTISLSVGNLMKITHMETIIMVLRSLKDENIIGKGCSGVVHRVDIGNNEAIAVKKLRTPAPMVSGDGGPNNDDSFSRELRILGLIRHRNIRDEENSCLEWGVRYKILLGAAQGLEYLHHDTEPPIVHRDIKTSNILIGPEFDACIADFGLAEFVDDCGFGNSPSAVAGSWGYIAPAQYILEYALIIVFPYLQLPSSLK 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0352 485 Gene3D Ribonuclease Inhibitor 27 169 IPR032675 -
Lele22g0352 485 Gene3D Ribonuclease Inhibitor 241 303 IPR032675 -
Lele22g0352 485 SUPERFAMILY Protein kinase-like (PK-like) 293 467 IPR011009 -
Lele22g0352 485 ProSiteProfiles Protein kinase domain profile. 313 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0352 485 ProSitePatterns Protein kinases ATP-binding region signature. 319 342 IPR017441 GO:0005524
Lele22g0352 485 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 60 151 - -
Lele22g0352 485 Pfam Leucine Rich Repeat 161 182 IPR001611 GO:0005515
Lele22g0352 485 Gene3D Ribonuclease Inhibitor 170 240 IPR032675 -
Lele22g0352 485 FunFam Leucine-rich repeat receptor protein kinase EMS1 152 243 - -
Lele22g0352 485 SMART serkin_6 313 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0352 485 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 40 303 - -
Lele22g0352 485 Pfam Leucine rich repeat 89 145 IPR001611 GO:0005515
Lele22g0352 485 Pfam Protein kinase domain 392 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0352 485 Gene3D Transferase(Phosphotransferase) domain 1 377 470 - -
Lele22g0352 485 Gene3D Transferase(Phosphotransferase) domain 1 304 376 - -
Lele22g0352 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Lele22g0352 485 Pfam Leucine rich repeat N-terminal domain 36 60 IPR013210 -
Lele22g0352 485 SUPERFAMILY L domain-like 25 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0352 Lele-ChrLele22 2207519 2209428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0352 79 469 Receptor kinase-like Gene Family AT5G56040 28.571 5.56e-45 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele22g0352 Pkinase 4.7e-12 CL0016