Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0303 ATGAAAGACAAATCTCGAACGAGTACCAACATAAGAGGGATAATGGGATATATGGCACCAGAATGGCTCAAGAATGCACCCGTCACTGCAAAGGTTGATGTTTATAGCTTTGGGGTCATCAAAAGGAGGGAATTTGAGAGCGATGGTGGATCACGATATGTGGAAGCTTTAAATGATTTCAATAGGTTTGAGAGAATGACAATGGCTGGATTATGGTGCCTTTCTCCTAACCCAACGATAGACAATGGAAATGGAGGTACTACAACCTCTGCCTCCTTGGAGAACAATGGCAATTTTGTAATGAGAGACTCCAATTCAAGGGTTGTTTGGCAGACTTTTGATTCTCCCACTAACACAATGCTGCCGGGGCAAGTCTTGAACAAGGATGGTGCTTTCTATTCCAAGGGGAAAGGATCTCTGAACTATTCAAATGGAAACTTCAGTCGGTGGATAAGGGTCTGGAGAGCCATTGTTGACCCTTGCAGAGTGGATACTATTTGTGGAGTGAATGCCTTGTGCATTTCAGCTGATAATGAATCAGTGCAGTGTGAATGTATTCCAGGTTTTAGCCCATTTAATACGAGAGATGTATCCTTAGGATGTCTCCCAGAAACTGTGATGAATTTTTGTACCCATGATCCTTCTCGGTTGAACTTCAAGCTGGAGGTTCTTGATGATAGGTCAGACTTTGCTGAGCTGAAAACTTCAATTCTGTTCGTCTTCACCTGA 729 0.4294 MKDKSRTSTNIRGIMGYMAPEWLKNAPVTAKVDVYSFGVIKRREFESDGGSRYVEALNDFNRFERMTMAGLWCLSPNPTIDNGNGGTTTSASLENNGNFVMRDSNSRVVWQTFDSPTNTMLPGQVLNKDGAFYSKGKGSLNYSNGNFSRWIRVWRAIVDPCRVDTICGVNALCISADNESVQCECIPGFSPFNTRDVSLGCLPETVMNFCTHDPSRLNFKLEVLDDRSDFAELKTSILFVFT 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0303 242 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 132 IPR036426 -
Lele22g0303 242 SUPERFAMILY Protein kinase-like (PK-like) 6 42 IPR011009 -
Lele22g0303 242 Pfam S-locus glycoprotein domain 137 191 IPR000858 GO:0048544
Lele22g0303 242 Gene3D - 76 145 IPR036426 -
Lele22g0303 242 Gene3D Transferase(Phosphotransferase) domain 1 1 75 - -
Lele22g0303 242 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 78 - -
Lele22g0303 242 ProSiteProfiles EGF-like domain profile. 157 195 IPR000742 -
Lele22g0303 242 Pfam D-mannose binding lectin 83 129 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0303 Lele-ChrLele22 1867367 1870910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0303 2 54 Receptor kinase-like Gene Family AT5G20050 45.283 1.79e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele22g0303 S_locus_glycop 2.1e-07 No_clan