Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0279 ATGAAGCCCAGTGGACCTAAGCTTCGACCCCAAAAGTCTTCATCTAAATCTTCTTCAGCTCAAGATGACATCGAAATAGAGATAGCCGAAGTGTTGTACGGCATGATGAGACAACCTCAAGGGATTTCCAAGCAAGAAACGACGGCGAACGATTTATTGAAGTCCGATTCCAAAGACACGAATAAATCTTGCGGCGATGGCAAGTCCTGGGTATCTTCACCGATCTCAAACTCACAATCCGCACCATCTCTATCATCATCGGTTCCTCCCCAAAATTCTCGCACTTCTATCACTACCTTATCCACTGTTGCGGCACCCAAGAGGAAAAGACCCCGTCATTTCAAGTATGAGGACGAGAACCCGACGAATTTTACCGCTCGTAATAGCCACATGCCATCAACGACGAAGGCCGAAACTGACCAGTCTTTAAAAGTCGAAACTTGTTCGCCGAATTTGGATAAAAACGTGGGATCTGCACCTGGAAGCGGCGGTGTATCATTCGATTTGGCCAATTCTGAAGTGGTTCCGGCTTCATCGGGGCCTCAACCGGAGTCAATTAAGTTTGAAAGCAACATTTCTTCAGATTCTAAGCCGGTGACAGAAGAATCAGAGAGGCAAGATGCGGGATTGAGTAAGGAGGAGCCTGATTCTCCCAAGAATGAATCTACTGTGTCAAAATTAGAGGAGGATGTGAAAGCGACTAAAGCGAATTCAATCATGTCCGGAAGTGGGAACCTGCAAGAAGAGAAGTTGAAGATAGATTTGATGGCGCCACCTCCTTCCTTGAGATCCTCTCCAGAAAGAGACGTGGACATAAATGCCGAAAATCCTAAGCCTTTGGCGGTAGACGCTGAACTGGATGCCAAGGCAGTGGTAAAGGAAGATGATAAATCACTGAAAATGAACAACGATGCGGCCGTGGCTGAGGAAACTGAGAAGCATGGAGGAGTAGCAGAAGAAGCTGATTCCCAAAAACCTTCAAACATTCAAAAGGACATGAGTATGAGCTTAAAACTTGATATAGAGAAGGTTGATAAAGATATCGGTAATGGCAACATGGTTGGGAAGAGGCATCAACAGCATGCACAGAGGCAGCAGCAGCAGCCGAACGTAGAGATAGCTGTTCAATCCAGCTCTGTGCCTCTACCATTGCCTGTTCCGAGCTGGCCTGGCGGGCTTCCTCCTATGGGATATATGACGCCTCTTCAAGGAGTTGTATCCAAGGATGGGACTGCCGTATCTTCTGCAGCTATACCACAGCAGGCTGCTGCTGCTGCATCTGTTCGACCTGGATCTGTGAGGTCTTTGACTCCTTCGGGCAATCCACCTAACTTGGCTATGATGACACCTGCAGCAATGGGGGCTGTTGGTGCTGCTACTGTTGCTAATGGTAGTCACAGTGAAAAGAAGCAGCAGCAGCATACTGCTACAAAGGCTGGAATTGAAGCTTCTCAGGCATTTGCCATGTCATTTGCATCTATAAAGATGCACATTGAGGACCAGGGGTCACATGGAAAGAGTCTTCAGTCGATCGATCTTTTGCTCTTCCAGGAGAAGGATGCAAGAGACATAGAGATTCCAAATACTAGACGGGAAGTTTTTGAGTTTATGATGAGATTCATATATACTGGATCCATTGATGTTACCCTTGATATTGCCCAAGATCTACTCAGAGCAGCTGATCAATATCTCTTAGAAGGAATCAAGAGACTTTGTGAGTACACGATAGCACAGGTTATATAA 1743 0.4636 MKPSGPKLRPQKSSSKSSSAQDDIEIEIAEVLYGMMRQPQGISKQETTANDLLKSDSKDTNKSCGDGKSWVSSPISNSQSAPSLSSSVPPQNSRTSITTLSTVAAPKRKRPRHFKYEDENPTNFTARNSHMPSTTKAETDQSLKVETCSPNLDKNVGSAPGSGGVSFDLANSEVVPASSGPQPESIKFESNISSDSKPVTEESERQDAGLSKEEPDSPKNESTVSKLEEDVKATKANSIMSGSGNLQEEKLKIDLMAPPPSLRSSPERDVDINAENPKPLAVDAELDAKAVVKEDDKSLKMNNDAAVAEETEKHGGVAEEADSQKPSNIQKDMSMSLKLDIEKVDKDIGNGNMVGKRHQQHAQRQQQQPNVEIAVQSSSVPLPLPVPSWPGGLPPMGYMTPLQGVVSKDGTAVSSAAIPQQAAAAASVRPGSVRSLTPSGNPPNLAMMTPAAMGAVGAATVANGSHSEKKQQQHTATKAGIEASQAFAMSFASIKMHIEDQGSHGKSLQSIDLLLFQEKDARDIEIPNTRREVFEFMMRFIYTGSIDVTLDIAQDLLRAADQYLLEGIKRLCEYTIAQVI 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0279 580 MobiDBLite consensus disorder prediction 39 281 - -
Lele22g0279 580 MobiDBLite consensus disorder prediction 8 22 - -
Lele22g0279 580 MobiDBLite consensus disorder prediction 1 23 - -
Lele22g0279 580 Gene3D Potassium Channel Kv1.1; Chain A 483 580 IPR011333 -
Lele22g0279 580 MobiDBLite consensus disorder prediction 198 233 - -
Lele22g0279 580 MobiDBLite consensus disorder prediction 121 156 - -
Lele22g0279 580 SUPERFAMILY POZ domain 520 578 IPR011333 -
Lele22g0279 580 Pfam BTB/POZ domain 517 577 IPR000210 GO:0005515
Lele22g0279 580 MobiDBLite consensus disorder prediction 295 330 - -
Lele22g0279 580 MobiDBLite consensus disorder prediction 172 197 - -
Lele22g0279 580 MobiDBLite consensus disorder prediction 295 320 - -
Lele22g0279 580 MobiDBLite consensus disorder prediction 64 103 - -
Lele22g0279 580 PANTHER PROTEIN TIME FOR COFFEE 1 427 IPR039317 GO:0042752
Lele22g0279 580 MobiDBLite consensus disorder prediction 423 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0279 Lele-ChrLele22 1714708 1725251 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele22g0279 BTB 3.7e-09 CL0033