Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0276 ATGGCAATTGTAGACTGCATTGTCAGTCTTTTTCTTCTCATTATGCTTGTTCTCATCATCGTCCTCGTCTTCTTTGCCTGTAAACCATGGCGCTTCCTTTTCTCTTGCCGGTCTCTTTCCTCCATCAAGTCCCAATCAGAATATGGGAGTTCTGTTCCATGTTCTTCGTGTACGTTGATTTATTTTGAGGTCGACCATGGCCCCCCGGGGAGTGGGGGGATGGGGAGGCTTGATTTCAGCTTTGCCTCCATGATTTACAGAAGGAAATCACTGCGTAAAGGTTTAGCCTTTGACGTCCTTTCCAGTCTCGCTAATGAACTTGAGAGGCCTCTCGTCTTAGATGATGCAAATTTGGCGCATGGCCCAAGTAGTGAATTGCCTATAGATTATGATCTTGAGGGTGCATCCATCCCCAATAAAGGCCATTTTCGCTCACCACGGCCTGGTGGACTTATTTATAAACCAAGGCTTTCTGCTGCTTCTTGCCATATGCCTCAAGATGTAATTTCTGATCCTTCAGAAGACTTCGCTGTTGGCCAGACACTTAAACTGTCCCCAGCCCACTTGGCAGAGATTCAGAAACACCATAGAAACTTTGAAACTGACAGTCTGCAAGACTTTGTACAGAGATATATATTAGATCAAAGAAGTTGCCTCACTCTAGAGGTGATCACTGGTCCTTCTTGTGGGCTTCGTTGTTCTGTACAATCAACAATTCCATCCAAGCTACCACTGACCTTAGGAAGAGTTTCTCCAAGTGATTTGTTAATAAAGGATTCAGAAGTCTCAGGAAAGCATGCACTCATAAATTGGAATTTAGAGAAAATGAAATGGGAGTTGATAGATATGGGTAGCCTTAATGGAACACTTTTGAATTCTCAACCAATCAACCATTTAGACCCTGGAAGCCGGCAATGGAGTAATCCAATTGAGCTTGCTAATGGAGATATCATAACACTGGGAATGACATCAAAAGTAATTGTTCATATTACTTCTCAAAATAAGATTCACATTCCCTTTGGAGTTGGTATGGCATCAGATCCCATGTCTAGGCGTCGAGGAGGAAAAAAGCTAGCCATGGAAGATGTTTGCTATTATCAATGGCCTTTACCTGGATTAGATCAGTTTGGACTGTTTGGCATTTGTGATGGGCATGGTGGAGATGGTGCTGCAAGATATGCTAGCAAACTTTTCCCTGAGATAGTTGCAAATATATTGTCAGATTCACTAAAAAGAGAGAAGATTGTAGCACTCTGTGATGCTTCAAATGTTCTAAGAGATGCATTTTCTCAAACAGAAGCTTGCATGAATCACTATTATGAGGGATGTACAGCAACGGTGCTTCTGGTTTGGGCTGATGGCAATGAAAATTTCTTTGCGCAATGTGCAAATGTTGGAGACTCTGCCTGTGTTATGAATGTCGCTGGTAAAGAAATTAAGATGACGGAAGATCATAAGATAGCAAGTTATGCTGAAAGGCTACGAATTGAAGAGACAGGCGAACCTCTGAGAGATGGGGAAACGCGTCTATATGGTATCAACTTAAATTCAAATGTACTTTTCTTGGATTTGATATTGAATCCGCAATCTAATTTTGCTTCTCACCTTTATACAGGTATAAATCTTGCAAGGATGCTTGGAGACAAATTTCTTAAACAGCAGGATTCTCGTTTCAGTTCAGAGCCTTCTATTAGTCAAGCTGTGCTCATTGATCAGGCAAGCAGGGCTTTTGCCATACTGGCAAGTGATGGGCTATGGGATGTTATGAGCGGAAAGAAAGCAATTCAGCTAGTGCTTCAGATGAAGGAGAAATACTCCACAGATGATGATGATTCAGCGGAAAAGATTGCAAATTTGTTGTTGAGTGAGGCGAGAACACTCAGAACAAAGGATAACACTTCAATAATTTTCTTAGATTTTGATACCTTTTCCAGATTTTCTTGTAAAGCTGAGTGTTAA 1959 0.415 MAIVDCIVSLFLLIMLVLIIVLVFFACKPWRFLFSCRSLSSIKSQSEYGSSVPCSSCTLIYFEVDHGPPGSGGMGRLDFSFASMIYRRKSLRKGLAFDVLSSLANELERPLVLDDANLAHGPSSELPIDYDLEGASIPNKGHFRSPRPGGLIYKPRLSAASCHMPQDVISDPSEDFAVGQTLKLSPAHLAEIQKHHRNFETDSLQDFVQRYILDQRSCLTLEVITGPSCGLRCSVQSTIPSKLPLTLGRVSPSDLLIKDSEVSGKHALINWNLEKMKWELIDMGSLNGTLLNSQPINHLDPGSRQWSNPIELANGDIITLGMTSKVIVHITSQNKIHIPFGVGMASDPMSRRRGGKKLAMEDVCYYQWPLPGLDQFGLFGICDGHGGDGAARYASKLFPEIVANILSDSLKREKIVALCDASNVLRDAFSQTEACMNHYYEGCTATVLLVWADGNENFFAQCANVGDSACVMNVAGKEIKMTEDHKIASYAERLRIEETGEPLRDGETRLYGINLNSNVLFLDLILNPQSNFASHLYTGINLARMLGDKFLKQQDSRFSSEPSISQAVLIDQASRAFAILASDGLWDVMSGKKAIQLVLQMKEKYSTDDDDSAEKIANLLLSEARTLRTKDNTSIIFLDFDTFSRFSCKAEC 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0276 652 ProSiteProfiles Forkhead-associated (FHA) domain profile. 245 296 IPR000253 GO:0005515
Lele22g0276 652 ProSitePatterns PPM-type phosphatase domain signature. 378 386 IPR000222 GO:0043169
Lele22g0276 652 CDD FHA 219 327 IPR000253 GO:0005515
Lele22g0276 652 ProSiteProfiles PPM-type phosphatase domain profile. 341 640 IPR001932 -
Lele22g0276 652 SUPERFAMILY PP2C-like 354 641 IPR036457 -
Lele22g0276 652 PANTHER PROTEIN PHOSPHATASE 2C 339 636 IPR015655 GO:0004722|GO:0006470
Lele22g0276 652 SUPERFAMILY SMAD/FHA domain 217 327 IPR008984 GO:0005515
Lele22g0276 652 SMART FHA_2 244 296 IPR000253 GO:0005515
Lele22g0276 652 CDD PP2Cc 353 640 IPR001932 -
Lele22g0276 652 Pfam Protein phosphatase 2C 351 633 IPR001932 -
Lele22g0276 652 SMART PP2C_4 335 638 IPR001932 -
Lele22g0276 652 Pfam FHA domain 246 321 IPR000253 GO:0005515
Lele22g0276 652 FunFam Protein phosphatase 2C 70 214 348 - -
Lele22g0276 652 Gene3D - 214 345 - -
Lele22g0276 652 Gene3D - 346 650 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0276 Lele-ChrLele22 1665089 1671623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0276 106 642 PP2C-type Phosphatase Gene Family AT5G19280 57.218 0.0 615