Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0274 ATGCAAGAATTTCTGGGTTCTGTTCGCCGATCCTTGGTTTTCAGGGGCCCAGGCGGGGACGATGGAGGGTTTGGTGTTGTCGGTCTGGTTGATAAGATTGGCTCCAGCATTCGCAAATCACGAATTGGGCTCTTCTCTCAGCCACGCGTCAGGGCTCTGCCGCCATTTCCCAAGGACAATACTCCTTCGATCCGGTGGCGGAAGGGCGAGTTGATTGGTTGTGGTGCCTTTGGTCGAGTCTACATGGGCATGAACCTTGATTCGGGGGAGCTTATTGCTGTCAAGCAAGTTTTAATCGCGGCGAGGAGTGCTTCGAAAGAGAAAACACAGGCCCATATTTTGGAACTTGAAGAAGAAGTGAAGCTTCTCAAGAATCTCAAACATCCAAATATTGTTAGATATTTGGGAACTGCTAGGGAGGAGGATTCCTTGAATATTCTCCTGGAATTTGTACCTGGAGGATCTATCTCATCACTCTTGGGGAAATTTGGATCCTTCCCTGAGTCTGTAATAAAAATGTATACAAAACAACTATTACTGGGTCTTGAGTACCTTCACAAGAATGGAATTATTCACAGAGATATTAAGGGTGCAAACATTCTTGTTGATAATAAAGGATGCATTAAACTAGCAGACTTTGGTGCATCTAAGAAAGTTGTTGAGCTGGCTACCATGAACGGTGCAAAATCAATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTCATTCTGCAGACAGGGCATAGCTTCTCTGCTGATATTTGGAGTGTTGGATGCACCGTGATAGAGATGGCAACAGGGAAGCCTCCATGGAGTGAACAGTTTCAGGAGGTTGCCGCTCTTTTCCATATTGGGACAACTAAATCCCATCCACCCATACCTGACCATCTCTCTGCTGAGGCGAAGGATTTTTTGTTAAAATGCTTGCAGAAGGAACCGGATCTAAGGCCTTCTGCATCAGATTTGTTACAGCATCCATTTATAACCTGCGAGTATCAAGAATCTAATCCCACATGCAGTTCAGTTGTGGTTAGTATCACTTCATTGGGTTTATATGATGATACCTTTTGTTTATGCAGTTTGGGTTTTGTCAGGGGAATAGGTCTCAAGGATGTTTGTCAGATGGATAGCATAAGATGCTCATCTGTGTCTCCTGAGACTCTTTCAAAATCAGATTTCTATCAAGGAACCAGCAATTATGATGATGATATGTGTCAAATAGATGACAAAGATGATCTTTTTGTTGGTGCATCAGTGAAGTCTGAATCTCACATTTCATCAGATGATATAAAGAGTTTCAACCCAATGTGTGAACCTATGGATGAATGGCCATGCAATTTCGATAAAAGTCCAGATTTGGAGAGAAAGGGAACAAACTTGTCTCCTGGTCAGACAATTAACAAGACAATGAGAAGCGCTGAAGCATCTCAAAAGGTGGAGAACGAATTTTCATTTCCAAGTGAACCTATAGGAGCTGATGACGATGAAGAAGTCACTGAGTCAAAAATTAGAGCTTTTCTAGATGAAAAGGCTCTAGAACTGAAGAAACTCCAAAGTCCTCTTTATGAAGAATTCTTTGGCATATCAAACGCAGCTTTTTCTCCCATACCTGTTTCAATTGCACACGGTGAAGCAGTTTCGGAAGTGTCAAATGTAACACCAAAAAGCAGGTCACCTAGTCAGGCTAGCAGACGATACTCAATGGCTGATGGTGCTAATATTGCAAGGCATGGAAGTCATAAACAAAATCAATCTAAAGTTAGCGGTGCAAATAGTCGGCCTTTGCAGGAAATCCACCCATCTGAACTTAACGAATGGAAACAGACACTTCAATATGCTAAGATGGAATCATTTAGTGCTAGCTCAACTTTCTCAGAGATACAAAGGAAATGGAAGGAAGAACTTGTTGAAGAGCTTGAGAGGAAGCGAGAGATGATGCGCCTGTCAAGCTTAGGAGGGAAGATTGCATCCCCAACTGATAGCAAATTTCGTAAACTGACAGATAGATCACCCTTTGCATTCCCAAGCTAG 2031 0.4279 MQEFLGSVRRSLVFRGPGGDDGGFGVVGLVDKIGSSIRKSRIGLFSQPRVRALPPFPKDNTPSIRWRKGELIGCGAFGRVYMGMNLDSGELIAVKQVLIAARSASKEKTQAHILELEEEVKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVIKMYTKQLLLGLEYLHKNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATMNGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSEQFQEVAALFHIGTTKSHPPIPDHLSAEAKDFLLKCLQKEPDLRPSASDLLQHPFITCEYQESNPTCSSVVVSITSLGLYDDTFCLCSLGFVRGIGLKDVCQMDSIRCSSVSPETLSKSDFYQGTSNYDDDMCQIDDKDDLFVGASVKSESHISSDDIKSFNPMCEPMDEWPCNFDKSPDLERKGTNLSPGQTINKTMRSAEASQKVENEFSFPSEPIGADDDEEVTESKIRAFLDEKALELKKLQSPLYEEFFGISNAAFSPIPVSIAHGEAVSEVSNVTPKSRSPSQASRRYSMADGANIARHGSHKQNQSKVSGANSRPLQEIHPSELNEWKQTLQYAKMESFSASSTFSEIQRKWKEELVEELERKREMMRLSSLGGKIASPTDSKFRKLTDRSPFAFPS 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0274 676 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 61 341 - -
Lele22g0274 676 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Lele22g0274 676 FunFam Mitogen-activated protein kinase kinase kinase 2 65 352 - -
Lele22g0274 676 Pfam Protein kinase domain 67 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0274 676 SMART serkin_6 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0274 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Lele22g0274 676 Coils Coil 106 126 - -
Lele22g0274 676 MobiDBLite consensus disorder prediction 577 595 - -
Lele22g0274 676 CDD STKc_MAPKKK 65 328 - -
Lele22g0274 676 ProSiteProfiles Protein kinase domain profile. 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0274 676 MobiDBLite consensus disorder prediction 475 495 - -
Lele22g0274 676 Gene3D Transferase(Phosphotransferase) domain 1 65 346 - -
Lele22g0274 676 FunFam Serine/threonine-protein kinase STE11 62 156 - -
Lele22g0274 676 MobiDBLite consensus disorder prediction 575 595 - -
Lele22g0274 676 MobiDBLite consensus disorder prediction 650 676 - -
Lele22g0274 676 SUPERFAMILY Protein kinase-like (PK-like) 65 329 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0274 Lele-ChrLele22 1643753 1649249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0274 1 654 MAP Kinase Kinase Kinase AT3G06030 57.949 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele22g0274 Pkinase 2.2e-72 CL0016