Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0273 ATGCAGCTCGATCTGGAATCATTGTCAGAAGCAACTTCCGGTGCCATTGGATCCCTTGTTAGCACCACTGTCTTGTACCCTCTCGATACTTGCAAGACCAAATATCAAGCTGAAGTTCAGGCTAAACAACAGCGAAGATACAGGCATATTTCTGATGTTTTATGGGAAGCAATTTCTAGTCGTCAGGTGCTTTCATTGTACCAAGGCCTTGGGACGAAGAACATCCAGTCCTTCATTTCGTCATTTCTATATTTCTATGGATACAGCTACTTTAGGAGGCTATACTTGGATAAAACTGGAAAGAAGACCATTGGAACGAAAGCAAACTTGCTTGTTGCCACTGCTGCTGGGGTCTGTACAATAGTAGTAACACAGCCCTTGGATACGGCAGCCTCAAGGATGCAGACTAGCGAATTTGGAAAATCCAAGGGATTTTGGAAGACCCTTTCAGAGGGTACATGGAGTGAGGCATTTGATGGCCTTGGGATATCTCTTCTTTTAACATCAAACCCTTCTATTCAGTATACGGCATTTGATCAACTGAAACAGAGACTACTAAAGGGAAAGATGAACAAGAAAATAGGTGCAAAGTCATCCCCGGAAGCTCTTTCTGCCTTTTCTGCTTTCATGCTGGGTGCAGTCTCAAAATGTGCTGCCACGTGCCTAACATACCCGGCTATCAGGTGTAAGGTTATGATTCAATCAGCTGAGTCAGACAACAATCGGATTACAGAAGCCGAGCGAAGAGCACAACGAACAATCTCAGGCGCACTCTATACTATTTGGAGAAGAGAAGGCCTGCTAGGTTTTTTCAATGGATTGCAGGTGCAGATGTTGAAAACTGTTCTGAGTGCAGCGCTACTTTTGATGGTAAAGGAAAAGATCACCAAGACATCATGGATTTTTATGCACATGATTGGCAGGTATCTGTCTGCTCCTCCCAAAAAGTCAACGTCTGCTTGTAATGGGGCAGGGACCTCCCAAGCTAGGCAGTGCAATGAAATGCCGAATCTACAGTCTATTGAAAGTCGATTACTTTACTCTCAGCTTCGTCACTTTGGTAATTCCCAACAGGATGAGAGACATGTGAAATGGCCTATCAAAATCATGAAACCGCCATGGTCAAGTAACAAGTCAATGGCCTTGTGCCCAATGACATCAAGTTCTCACTGCCTGCTTGAGGGGAGGTCGCAGGTTCCTATTGGGGGCGCTTACAGGCTAATTGACGTGCCCATGAGCAATTGCATCAACAGTGGGATCAACAAAGTGTACGTTCTCACTCAGTTCAATTCAGCTTCACTCAATAGGCACATTGCTCGTGCTTACAACTCTGGTACTGGGGTTACCTTCGGAGATGGCTATGTCGAGGATCCAAGAAGTAAGGACATTGAAGATGTATTGATTCTTTCCGGTGATCACCTGTACAGGATGGACTATATGGACTTTTTCAAGATACTAATGCTGTTCATATTTCAGCAAGTAGATACAACAGTGCTGGGCCTTTCAAAGGAGGAGGCTCAAAAGAAACCATATATTGCTTCCATGGGAGTGTACGTTTTCAAGAAGGAGATACTTCTTAACCTATTAAGGTGGCGTTTCCCAACTGCAAATGACTTTGGATCAGAGGTCATTCCTGCTTCGGCCAGAGAATTCTACATGAAGGCTTATCTCTTCAATGATTACTGGGAAGACATAGGAACCATCAGATCCTTCTTTGAGGCAAATCTAGCCCTCACTGAACATCCTCCCAGGTTTAGCTTTTATGACGCAGCAAAACCAATGTATACATCAAGGAGGAACTTACCACCTTCAAAGATTGACAACTGCAAGATTGTTGATTCAATAATATCGCATGGAAGCTTCTTGACCGATTCCTCGATAGAGCACAGTGTAGTTGGAATCAGGTCCAGAACAAACTCAAACGTGCATTTGAAGGATACAGTGATGCTTGGTTCTGACTTCTATGAAACAGACTCTGAAATAGCAGCACTGCTAGCGGAGGGAAGAGTGCCTATTGGAATAGGAGAAAATACAAAGATCAAGTACAATCTACAACTTAATTGCATTATTGACAAAAATGCCAGAATCGGGAAGAAAGTTGTCATAGCAAACTCAGAGGTATATGTTATCGATCTTCATTCTAGGGAAGTAGACGAGAGCTGGGCATACAAGAGGCTGACAGATCTTCAGAAGGGTTCTACATTCGGTCTGGAGTGA 2217 0.4371 MQLDLESLSEATSGAIGSLVSTTVLYPLDTCKTKYQAEVQAKQQRRYRHISDVLWEAISSRQVLSLYQGLGTKNIQSFISSFLYFYGYSYFRRLYLDKTGKKTIGTKANLLVATAAGVCTIVVTQPLDTAASRMQTSEFGKSKGFWKTLSEGTWSEAFDGLGISLLLTSNPSIQYTAFDQLKQRLLKGKMNKKIGAKSSPEALSAFSAFMLGAVSKCAATCLTYPAIRCKVMIQSAESDNNRITEAERRAQRTISGALYTIWRREGLLGFFNGLQVQMLKTVLSAALLLMVKEKITKTSWIFMHMIGRYLSAPPKKSTSACNGAGTSQARQCNEMPNLQSIESRLLYSQLRHFGNSQQDERHVKWPIKIMKPPWSSNKSMALCPMTSSSHCLLEGRSQVPIGGAYRLIDVPMSNCINSGINKVYVLTQFNSASLNRHIARAYNSGTGVTFGDGYVEDPRSKDIEDVLILSGDHLYRMDYMDFFKILMLFIFQQVDTTVLGLSKEEAQKKPYIASMGVYVFKKEILLNLLRWRFPTANDFGSEVIPASAREFYMKAYLFNDYWEDIGTIRSFFEANLALTEHPPRFSFYDAAKPMYTSRRNLPPSKIDNCKIVDSIISHGSFLTDSSIEHSVVGIRSRTNSNVHLKDTVMLGSDFYETDSEIAALLAEGRVPIGIGENTKIKYNLQLNCIIDKNARIGKKVVIANSEVYVIDLHSREVDESWAYKRLTDLQKGSTFGLE 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0273 738 Pfam Nucleotidyl transferase 507 580 IPR005835 GO:0009058|GO:0016779
Lele22g0273 738 Pfam Nucleotidyl transferase 397 484 IPR005835 GO:0009058|GO:0016779
Lele22g0273 738 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 313 IPR045900 GO:0005347|GO:0006635|GO:0015217
Lele22g0273 738 Gene3D Mitochondrial carrier domain 2 300 IPR023395 -
Lele22g0273 738 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 298 IPR018108 -
Lele22g0273 738 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 513 523 IPR005836 GO:0005978|GO:0008878
Lele22g0273 738 FunFam Peroxisomal adenine nucleotide carrier 1 3 299 - -
Lele22g0273 738 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Lele22g0273 738 SUPERFAMILY Nucleotide-diphospho-sugar transferases 399 700 IPR029044 -
Lele22g0273 738 Coils Coil 233 253 - -
Lele22g0273 738 SUPERFAMILY Mitochondrial carrier 8 294 IPR023395 -
Lele22g0273 738 SUPERFAMILY Trimeric LpxA-like enzymes 598 707 IPR011004 -
Lele22g0273 738 CDD LbH_G1P_AT_C 602 706 - -
Lele22g0273 738 Pfam Mitochondrial carrier protein 203 297 IPR018108 -
Lele22g0273 738 Pfam Mitochondrial carrier protein 104 187 IPR018108 -
Lele22g0273 738 Pfam Mitochondrial carrier protein 7 98 IPR018108 -
Lele22g0273 738 Gene3D Hexapeptide repeat proteins 600 715 - -
Lele22g0273 738 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 397 487 IPR029044 -
Lele22g0273 738 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 490 599 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0273 Lele-ChrLele22 1632817 1641073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0273 23 293 Chloroplast and Mitochondria Gene Families AT1G25380 27.719 2.26e-12 67.4