Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0256 ATGAATATCGTCTCGCTTTCTGTCTGCCAACAAGTACGGCCCTTAGTGAATTTCCAAAGGGGACTCCCCATGGAGCCTTTCTTCTGCCACCCCCGCAAAGACAAGGCCGTCGTCATACTCGGCGCCACTGGCACCGGCAAGTCCAGGCTCGCCATCGATCTCGCCACCTGCTTCCCCCCCGCAGAGATTGTCAACTCCGACAAAATGCAAGTCTACCGAGGCCTCGACATCACCACCAACAAGGTCACCGAAGAAGAGTGTCGCGGTATCCCGCACCACCTCCTTGGAATTGCTGATCCTAACTCTAATTTCACCGCTGATGACTTCACCCGCCATGCCTCCTTCGCCATTGATTCCATCGTCAACCGAGATGGCCTTCCCATCATCGCCGGCGGCTCCAATTCCTATATTGAAGCCCTTGTCGAAGACGACGCTGCGTTCCGGTTGAAGTACGAGTGTTGCGTTCTCTGGGTGGACGTCTCTGAGGACGTCCTCGATTCATTCCTCTCGAAGCGGGTCGATCGGATGATCGAAGCTGGTCAGGTCGAAGAGGTCCGTCAGTTTTTCGACCCGGCCGTGGATTACACAATCGGAATCAGAAAAGCCATTGGAATACCTGAATTTGATGAATTCCTTCGAACAGAAGCTACGGCCGATGAACGGACCAAGAAGAGGTTACTAGAGGCTGCCATTGCGAAGATTAGAGCTAACAATTGCTCACTTGCCCGTCGACAGGTTCAGAAGATTCGTCGGCTTTACAACATGTGGAAGCGAAAGACGTATCGCCTCGACGCCACTGAGGTGTTCAAGAAATCGGGTGACGAGGCAGAGGAACTGTGGGAGACTAACGTGCTTGCCAAGAGCCAGATGATTGTACACAAGTTCCTGTACGAGGACAGTCCGACGGTTCCGGCCGCCCCCGTAATGTCCTCGGTGGCACCATATCCGCAGCCGAAGCAGGTGGCGACACCTCCGATAAGACTTGCTATATAA 993 0.5398 MNIVSLSVCQQVRPLVNFQRGLPMEPFFCHPRKDKAVVILGATGTGKSRLAIDLATCFPPAEIVNSDKMQVYRGLDITTNKVTEEECRGIPHHLLGIADPNSNFTADDFTRHASFAIDSIVNRDGLPIIAGGSNSYIEALVEDDAAFRLKYECCVLWVDVSEDVLDSFLSKRVDRMIEAGQVEEVRQFFDPAVDYTIGIRKAIGIPEFDEFLRTEATADERTKKRLLEAAIAKIRANNCSLARRQVQKIRRLYNMWKRKTYRLDATEVFKKSGDEAEELWETNVLAKSQMIVHKFLYEDSPTVPAAPVMSSVAPYPQPKQVATPPIRLAI 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0256 330 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 145 IPR027417 -
Lele22g0256 330 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 260 - -
Lele22g0256 330 FunFam Adenylate isopentenyltransferase 5, chloroplastic 162 260 - -
Lele22g0256 330 Gene3D - 33 296 IPR027417 -
Lele22g0256 330 Hamap tRNA dimethylallyltransferase [miaA]. 36 281 IPR018022 GO:0008033
Lele22g0256 330 Pfam IPP transferase 70 143 - -
Lele22g0256 330 Pfam IPP transferase 150 251 - -
Lele22g0256 330 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 33 296 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0256 Lele-ChrLele22 1516094 1517086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0256 150 296 C2H2 Transcription Factor Family AT2G27760 29.714 3.04e-16 77.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0256 22 1516094 1517086 Lele23g1811 23 21579585 21580571 hybridization
Lele22g0256 22 1516094 1517086 Lele24g0238 24 1512826 1513818 hybridization