Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0249 ATGTTTTTTTCCCAGTGCAGAAGGTTCAGTAATGAGAAATATGATGATCAGTATCATCCTGTTCAGAACAGTGCTAGGGTTATCCTAACTGTCTTGAATGATGCTCTCAAGAGCATGTACAATGCTGAGAAAAGGGGAAAGCGTCAGGTCATGATTAGGCCATCCTCAAAAGTCATTATTAAGTTCCTCTTGGTCATGCAGAAGCATGGATACATTGGGGAGTTTGAATATGTGGATGACCACAGGGCTGGCAAAATTGTGGTTGAGCTGAATGGAAGATTGAACAAATGTGGGGTTATTAGTCCCCGTTTTGATGTGGGTGTCAAGGACATAGAACCCTGGACTGCAAGGCTACTTCCCTCAAGACAGTTTGGCTACATCGTCTTGACAACCTCAGCTGGTATTATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGGAAAGTGTTGGGTTTCTTTTACTAG 468 0.4316 MFFSQCRRFSNEKYDDQYHPVQNSARVILTVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKDIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0249 155 SUPERFAMILY Ribosomal protein S8 29 155 IPR035987 GO:0003735|GO:0005840|GO:0006412
Lele22g0249 155 Hamap 30S ribosomal protein S8 [rpsH]. 27 155 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele22g0249 155 FunFam 40S ribosomal protein S15a 26 94 - -
Lele22g0249 155 PANTHER 40S RIBOSOMAL PROTEIN S15A 29 154 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele22g0249 155 Pfam Ribosomal protein S8 32 155 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele22g0249 155 Gene3D - 95 155 - -
Lele22g0249 155 FunFam 40S ribosomal protein S15a 95 155 - -
Lele22g0249 155 ProSitePatterns Ribosomal protein S8 signature. 125 142 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele22g0249 155 Gene3D - 27 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0249 Lele-ChrLele22 1458895 1460555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0249 29 155 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 95.276 5.72e-89 253
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0249 22 1458895 1460555 Lele23g1818 23 21640024 21640587 hybridization