Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0237 ATGATTGTAGAGGAAGACCCTGTAGGTATAAAACTGGCTATGAATAATGCCAGTGGAGAGCAGGAAAGAGAACTTGCCCATGAACCATACATTGGATTAGAGTTTGAATCAGCAGATGATGCACTCAAGTTTTACACGTTATATGCAAAGCTAGCTGGATTTAAAGTTCGGATTGGTCAGTTGTATCGATCAAGAACTGATAAATCAGTTTCTTCCAGAAGATTTGTGTGCTCAAAGGAGGGATACCAACTCAGTTCAAGAACCGGTTGTCCAGCATTTATAAGAGTACAAAAGCGTGATTCAGGGAAGTGGGTTGTTGTTCATTTCATTAAGGGCCACAATCATGAACTTGAACCTGAAGGTGAGGGTGAAAGTTGCCTTCCTAATTTGCAGCAGAAATATGCTACAGGTATAAAATCTGTTACTGAGGGGTCTCACAGACCAAGAAAAAAGATGCTTCAAGTCAAGGACGAGCATTGTTCCTTTGGCATGTTTAATTTTAAGCAGATGATGAAAGCAGATGAAGGGCCATCAAGAGCTGAGCCATATGTAGGTCAAGAATTCAGTTCATCTAATGAAGCTTGCCAATCTTATCAGGCATATGCAGCATCTGTGGGTTTCAGAGTTCGTATTGGTCAATTGTTTCGGTCTAAAACTGATGGATTAATTACATCCCGACGATTTGTGTGCTCCAAAGAGGGGTTCCAGCACCCTTCAAGAGTTGGTTGTGGAGCTTATTTGAGAGTTAAGAGACAACTATCTGGGAAGTGGGTGGTGGATCGTCTTCATAAGGAGCATAATCATAATCTTGATCCTGAACAGGAGGGTAGGCCACAAAGTCTGCCTGCTTTAAATATTTTGACTGATGAGGTTGATGCAGGATTGGTAAATGGTGACTTATTTAGGATAGATAACTACAACCCTATTGCTAGAGGAGGCAGACAAAATCATATTAAAAGTGACTGCGGCCCTCCGGAACTAGGGAATTTGATGCTATGGAATCTAAGAGAAACTGCATGTAAATATATAGATGCTGGTGCAACGTCTCTTGACAAGTACAAACTTGCCTATGAGATTTTGCAAGAGGGGGGGAGGAAGATATGTTGGCATCGACCTACCATTGATTGGGACTCTGAAACCAATGAAAACCCCCACTTCATCATCTGTTTGAATTGTGCGCCAACGGATGATGGGATCATTTACATTATTCGATTGTCGCATATCAGGGTTGGATAA 1236 0.4159 MIVEEDPVGIKLAMNNASGEQERELAHEPYIGLEFESADDALKFYTLYAKLAGFKVRIGQLYRSRTDKSVSSRRFVCSKEGYQLSSRTGCPAFIRVQKRDSGKWVVVHFIKGHNHELEPEGEGESCLPNLQQKYATGIKSVTEGSHRPRKKMLQVKDEHCSFGMFNFKQMMKADEGPSRAEPYVGQEFSSSNEACQSYQAYAASVGFRVRIGQLFRSKTDGLITSRRFVCSKEGFQHPSRVGCGAYLRVKRQLSGKWVVDRLHKEHNHNLDPEQEGRPQSLPALNILTDEVDAGLVNGDLFRIDNYNPIARGGRQNHIKSDCGPPELGNLMLWNLRETACKYIDAGATSLDKYKLAYEILQEGGRKICWHRPTIDWDSETNENPHFIICLNCAPTDDGIIYIIRLSHIRVG 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0237 411 Pfam FAR1 DNA-binding domain 43 118 IPR004330 -
Lele22g0237 411 Pfam FAR1 DNA-binding domain 198 271 IPR004330 -
Lele22g0237 411 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0237 Lele-ChrLele22 1410026 1413545 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele22g0237 FAR1 2.1e-18 CL0274