Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0209 ATGAGGAATGCCTTTTGTCGGATTTTCAAAGATGATGATATTGGCAGCGCCGAATCCGTTGAATTAGATAAGGGGGACTCAAAAGAGAAGAAGCCTTCTTCAAAAGGCAGACGGGCTCGGACTGGGTATTCTGATTCCATTAGAGAATTGGCCTTGAATTCTTTATATATTAAAGAACGAGGCGCACCTGAGTGGCCTGCTATGTCTGAGGACTGCCGGAGAAGTTTAGAATATGAAATTCCTTCTTCCAATGCCAGTACTTCCGATTCTGAGTGTCCATCAGATGCTGCAAACAGTGCTCAGTGGCGTGGCCTGCTTAAATTCGTGAAAAAAGGAGGATCCCACATGCGTTTCGCTCATCCACCTAAAAATATTCCCAAACTCACTCGAAGAACAGTTAAACGTATCAAGGAGGAACTCATGCCTGGTCCACATTCTTCAGTTTCATCCCCATCCCTTGATCCAGATTTTTACTGCTTCAAGTCTTCATGGATAAACTTTTCTTTTGCACAGCTCAACACTGCCACCAACAACTTTAGTGATGATTTGTTGATTGGGAAGGGAGGTTATGCTGAGGTTTACAAAGGAAAAATGGAAGATGGGACATATGTTGCGATCAAACGGCTGATGAAAGGAAGCCAAGAAGAAATGACAGCTGATTTCTTGTCTGAACTTGGTATTATAGTTCATGTTGATCATCCCAATATTGCCAGATTGATTGGTTACGGTGTGGAAGGGGGCATGTTTCTTGTTCTTCAGTTATCTCCGCATGGCAGCCTCGCCGGCATACTTTATGGACCTCGAGAGAGACTGGATTGGAACATGAGATTTAAGGTTGCACTAGGGACTGCTGAGGGCCTTCAATATCTGCATGAGGGATGTCAAAGAAGGATCATTCACAGAGATATCAAGGCTGCTAATATTCTGCTGTCAGAGGATTTTGAGCCTCAGGTGTCTGATTTTGGGCTTGCAAAGTGGTTGCCTGATCAATGGACTCACCATAATGTGGACAAAATTGAAGGCACATTTGGTTACCTTCCTCCTGAATTCTTCATGCATGGTATAGTAGATGAAAAGACCGACGTCTATGCTTACGGAGTGCTATTATTGGAGCTCATTACAGGAAGACAGGCTTTGGATGGCTCTCAGAAAAGTTTGGTGATGTGGGCAAAACCGTTGCTATCTGTAGATAAAATCAAAGAGCTCGTTGATCCATGTCTGAGTGGTGCTTATGATGAAGAACAGATGAAAATTGTTGTAATGACAGCTTCCTTGTGTATAGAGCAGTGTTCAGTGGAGCGACCACATATGAGCGAGGTTTTGAAGACTCTGAAAGGAGACGAAGAGGGCTTGAAGTTCATAATGAAGCGCCAGAAGTCAAAACTGAGAAGGACGTATTCTGTCGAGCTGCTAGACGCAGAGGATTACAATTCAACAAAGTATTTGAGTGACATGAATCGAGAGACGAGTCATGAGATCTCTGATTCTTTGAACGAAGAAAACATTCGGAAGTAG 1515 0.4343 MRNAFCRIFKDDDIGSAESVELDKGDSKEKKPSSKGRRARTGYSDSIRELALNSLYIKERGAPEWPAMSEDCRRSLEYEIPSSNASTSDSECPSDAANSAQWRGLLKFVKKGGSHMRFAHPPKNIPKLTRRTVKRIKEELMPGPHSSVSSPSLDPDFYCFKSSWINFSFAQLNTATNNFSDDLLIGKGGYAEVYKGKMEDGTYVAIKRLMKGSQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLAGILYGPRERLDWNMRFKVALGTAEGLQYLHEGCQRRIIHRDIKAANILLSEDFEPQVSDFGLAKWLPDQWTHHNVDKIEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDGSQKSLVMWAKPLLSVDKIKELVDPCLSGAYDEEQMKIVVMTASLCIEQCSVERPHMSEVLKTLKGDEEGLKFIMKRQKSKLRRTYSVELLDAEDYNSTKYLSDMNRETSHEISDSLNEENIRK 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0209 504 ProSiteProfiles Protein kinase domain profile. 179 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0209 504 Gene3D Transferase(Phosphotransferase) domain 1 256 468 - -
Lele22g0209 504 Pfam Protein tyrosine and serine/threonine kinase 185 442 IPR001245 GO:0004672|GO:0006468
Lele22g0209 504 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 155 254 - -
Lele22g0209 504 PANTHER OS08G0249100 PROTEIN 53 484 - -
Lele22g0209 504 SUPERFAMILY Protein kinase-like (PK-like) 167 469 IPR011009 -
Lele22g0209 504 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 256 459 - -
Lele22g0209 504 ProSitePatterns Protein kinases ATP-binding region signature. 185 207 IPR017441 GO:0005524
Lele22g0209 504 MobiDBLite consensus disorder prediction 18 43 - -
Lele22g0209 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 298 310 IPR008271 GO:0004672|GO:0006468
Lele22g0209 504 SMART serkin_6 179 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0209 504 Gene3D Phosphorylase Kinase; domain 1 148 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0209 Lele-ChrLele22 1293358 1297132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0209 149 446 Receptor kinase-like Gene Family AT1G53420 41.830 5.12e-70 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele22g0209 PK_Tyr_Ser-Thr 5e-40 CL0016