Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0208 ATGGAGGTCGGTCAGATTCAGAGACAGTGGGTCGACTGCATGAAATCCTTGTTCATCGAGGGCTTCCTTGATGCTCAGTTCTTACAACTCAAGCAACTGCAAGACGAGTCCAACCCTGAATTTGTTGTTGAAGTTGTTTCCCTCTTCTTTGAAGATTCTGAGAGGCTTCTTACTGATCTCTCCTATGCTCTAGATCAGAAAGCAATTGACTTCCAAAAAGTTGATGCTCATGTTCACCAGTTGAAGGGTAGCAGCTCAAGCATAGGTGCTCAAAGGGTCAAAAATGCCTGCATTGCTTTCCGCAGCTTCTGCGAGGAACAGAATGTAGATGCGTGCCTGAGATGTCTGCAACAAGTAAAGCAAGAGTACTGCCTTGTCAAAACTAAACTTGAAACTCTGCTTGGGCTTGAGGAACAGATTGTGGGAGCTGGTGGGTCAATCCCTATGATGGAACTGAGTTTGTAA 465 0.4538 MEVGQIQRQWVDCMKSLFIEGFLDAQFLQLKQLQDESNPEFVVEVVSLFFEDSERLLTDLSYALDQKAIDFQKVDAHVHQLKGSSSSIGAQRVKNACIAFRSFCEEQNVDACLRCLQQVKQEYCLVKTKLETLLGLEEQIVGAGGSIPMMELSL 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0208 154 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 6 142 IPR045871 GO:0000160|GO:0009927|GO:0043424
Lele22g0208 154 CDD HPT 44 123 IPR008207 GO:0000160
Lele22g0208 154 Pfam Hpt domain 44 122 IPR008207 GO:0000160
Lele22g0208 154 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 143 IPR008207 GO:0000160
Lele22g0208 154 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 5 140 IPR036641 GO:0000160
Lele22g0208 154 Gene3D HPT domain 1 154 IPR036641 GO:0000160
Lele22g0208 154 FunFam Histidine-containing phosphotransfer protein 1 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0208 Lele-ChrLele22 1290120 1291536 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0208 22 1290120 1291536 Lele23g1847 23 21797446 21803123 hybridization
Lele22g0208 22 1290120 1291536 Lele24g0200 24 1306070 1307498 hybridization