Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0205 ATGGAAACCCAAGCTCCTTCTACTCCGACACCAGCCAAATCACGCTCATTGGCGCCGCCACCGCCGCCGCAGTCACCACAACCATCGGTCCACGATCAGCCACCGCGTGCTTCTGAAATGGAGGTGCAACATCGTTTGTCGGAAGATTCTCCATCTGTTTGGGACCTGGATTGCCTGTTAGATTTCAGCTTGGACGAGAATTTAGCTCTCTCCTTAGACGATTATCATCCTAACTCAGAGGTTCCTCAAAATCTGGCGCTTCCTCCTCAAGATATTCCTAGTTCCGAGAAGGTTCGCAAGCGAGACCCCAGGTTGACTTGTTCTAATTTCCTGGCCGGTCGGGTCCCATGTGCATGCCCGGAGCTCGATGCTAGGCTTGAGGAAGAAGATTTTCCTGGTAAGAAGCGCGCTCGCACCGTGCGGGCATCGGCTGGGATTGCACGGTGCCAGGTACCTGGGTGTGAAGCAGATATTAGTGAGCTCAAAGGGTATCATCGGAGGCACAGGGTTTGTTTGCGTTGCGCGAATGCTAGTACGGTTATGCTTGATGGCCAGGCCAAGCGATACTGCCAACAGTGTGGAAAGTTTCACATATTATCAGATTTTGATGAAGGTAAACGAAGCTGTAGAAGAAAATTAGAGCGCCACAACAACCGAAGGCGTAGAAAGCCTACAGAAACCAGAGCTGCAGAAGATCATGAAGTTCAACCTGTCAAACTGACTGAGGATGATGTGGGAAAAGATAGTTCACATATAAGCAGTGAGATAAACGACATAGAAATTGCCCTGGAGCATGAAGATGGACAACTTACTGCCCCATGTTTGGCTCCTGATACCCTGAACACTAAAAATGATAGTTTTGCGTCCTTTGTTGCTTGCGGTGAAGCACGGGTGAATGGTGGAAAAGAGAATTCTAACATTTCTTATTCACCACCATATTGTGAAAAGAGTGCTTACTCGTCTATGTGCCCAACAGGTCGGGTATCTTTTAAACTTTATGATTGGAATCCTGCGGAGTTTCCTAGAAGGCTACGGCATCAAATTTTCCAGTGGTTGGCCAGTATGCCTCTTGAGCTGGAGGGTTATATCCGCCCTGGGTGCACAATTCTGACTGTTTTTGTTACTATGCCTAAATTTATGTGGACAAGTTTACTTAAAGACCCTCTGTATTATCTGCAAGACATAGTAGCTCCAGGAAAGATGCTATTTGGAAGAGGTACCATATTTGTTCATCTAAATGACATGGTCTTCTGCGTTTTGAAAGATGAAACTTCTGTGATGGAAGTTCAGATAAAGGTGCATGCACCAAGGCTTCACTATGTTCATCCCACATGCTTTGAGGCTGGAAAACCTATGGAATTTGTTGCTTGTGGAAGTAACTTGCTGCAGCCTAAGTTTCGGCTTCTCGTATCTTTTTCAGGAAAGTATTTAGAGTGTGAATATTGTGTTGCATCTCCTCATAACTGGGCAGGAGATGGCATTTCTTGTGCTTTTGACAGTCAGTTGTACAAGATTTGTGTCCCTCATACAGAGCCAAACATATTTGGACCTGCATTTATTGAGTCCGGGTCTTCAGAAAAATCAGTGGAAGATGGGATGCGGAGCCTCAGAGTTATTGCTAGACTCCAAGAAATTATCTCAGGGAAGGACGAGAATGTGCTGCCTGTCCAGTTTAACAAACCCAGTGACTTAGGTGGTGGCATTTCACATGACGGCAATGCCTTCAAGAAGGCTCCTTGGCACATTCTTGATGGGCGGCCCCTTGCTGGGCCTCTGAATGGTTTTGTTGCAGACTTGCAGGTGAGGATGAGGGCTGTTGCAAATAGGGACTCCACTCTTCCCTACTCAATTGCTGGTTCTGATATGGCACAGAGGAAGACTTCAGTGAACTTGACCCCTGGGGACAAGGTGGAGAATGAGTCTGGTTTATCAAACTTCATTCCTGTACTCATTGGGGACGCTGAAATCTGCTCTGAATTGGAGAGAATGCAGCAAAAACTAGATATATCTCTTCTTTCGAAACAAATGCAGGATGCATCTGGCAGTTCTATCTGCAGCTTCTGTGAAGCTTTTGCACTGAGACATACAGCATACTCAGACTTGCTTTTAGATATAGCATGGCTGCTTAAGGATCCTACTTCAGAAGATTTTCATAGAGCCATGACAGCTTCACAGATTCAAAGATTTTGTTATTTGATATACTTTCTGATGTGCAATGAATTAATTGTCGTTTTGGGGAAAATATTACGGAACTTGAATATTTTGACAGAAAGCATGGAAATGAACAATGTGATTAACAGAATGAGTGAGGCTGACATGACATTACTACTGAAACACACGTATCAAGCTAGAGACTTCCTTTATCAGAAACATCATAGGGGTGGAGATTTAAACTTTCACGCAGTTTTTTCTGAAATGGAAGGACATAAGGTTGCTCCAAGCTGCTATCAAGATAACATGCCATCAGTTGTCACCATCAGCAATCAGGGTGCCGAGTCAAGGGCAGATGCTAAATTGGGAATGAGAAGTCCAACTTGGGCTGACAAAAGTGAAAGCATACCTCTTTTGGGGAGTGATATTATAATGAACATGGAAGAGTTGCCTCGGAGATCTGGTTATCGACATCTCACGAGGGGATTCTTGACGTCGCGTCCAGCCATTCTCATGATTGCTTCAGTTGCTGTATGTCTTGGGGTTTGCGCAGTCCTCCTTCATCCTGGGAGGGTTGGTGAGTTTGCGGCATCTATGAGAAGTGCAATGACGTTGAAAGTGGAGAGGATTTGCAAGAACCTTTCATCCAACAAGGACACAGATCAGCAGCTTCAGCCTGTAAAGATGGTGAAGAAGTTGACAAAAGGTTTGAAAATGGATCCATTGCCATGGTTTTACTCAGCACTTTTGTGGCTGTTTGTGGTGCCTTCTCTTTTGGAAATTGTTTTTAGCTTAAGTAATAAGCTATTATTTTGTCCGGTTGGGTATTCAGCACCTACTCAAGCGACTATCAGAGGAGATCTTAAACTTTCACTTGCTGAGGTATCGACTTTATTCCATGTTCGGTTCTTTTGTAACCATTGGAGCAATGCTGGGGCTGTAACTAGTGGCCGGATTGCAGATTTCATGGGAAGGAAAAGGGGGTCTTTCTCACTTGACCTGGGAAGATTTTTCACTGCTTATGATTGTTATTGGATCATCAGTCTCATTCTTAATGGGAAGTATAGTAACTTGGAGGAGACTGGCCTTGTCTGGGCTCATGCCTCTTATGTCCTTGTTGATTGGTCTGTGCTTTATCCCAGAGTCACCCAGATGGCTGATTGGGGTTGGAATAATGATTTGTCAACAATCTATGGGAATCAATGGACTTACTTAATCCAACATTGGTACCAGAGGCTATGCTTGTATACAGGAGCATGGATGCTTATAAGTAAAACTGCTTATACACAATTGCAGGTTTCTGCAGGTGGGACATTCTTAGGATGCTTCATCACTGGAATTGCATTCCTTCTCAAAATCTATATTGCAGCATTTTCAATTGGAATGGGATCAGTGCCTTGGGTGATTATGTCTGAGATATTTCCCATAAATGTGAAGGGAATAGCTGGAAGCTTGGTGGTTCTGGTAACCTGGTACTTTGATCTTGTATGCTGGATTTTCATTGGTGACCATTCTGTTTGTGGCAAAGTTGGTGCCAGAAACCAAAGGGAAAACACTTGA 3711 0.4438 METQAPSTPTPAKSRSLAPPPPPQSPQPSVHDQPPRASEMEVQHRLSEDSPSVWDLDCLLDFSLDENLALSLDDYHPNSEVPQNLALPPQDIPSSEKVRKRDPRLTCSNFLAGRVPCACPELDARLEEEDFPGKKRARTVRASAGIARCQVPGCEADISELKGYHRRHRVCLRCANASTVMLDGQAKRYCQQCGKFHILSDFDEGKRSCRRKLERHNNRRRRKPTETRAAEDHEVQPVKLTEDDVGKDSSHISSEINDIEIALEHEDGQLTAPCLAPDTLNTKNDSFASFVACGEARVNGGKENSNISYSPPYCEKSAYSSMCPTGRVSFKLYDWNPAEFPRRLRHQIFQWLASMPLELEGYIRPGCTILTVFVTMPKFMWTSLLKDPLYYLQDIVAPGKMLFGRGTIFVHLNDMVFCVLKDETSVMEVQIKVHAPRLHYVHPTCFEAGKPMEFVACGSNLLQPKFRLLVSFSGKYLECEYCVASPHNWAGDGISCAFDSQLYKICVPHTEPNIFGPAFIESGSSEKSVEDGMRSLRVIARLQEIISGKDENVLPVQFNKPSDLGGGISHDGNAFKKAPWHILDGRPLAGPLNGFVADLQVRMRAVANRDSTLPYSIAGSDMAQRKTSVNLTPGDKVENESGLSNFIPVLIGDAEICSELERMQQKLDISLLSKQMQDASGSSICSFCEAFALRHTAYSDLLLDIAWLLKDPTSEDFHRAMTASQIQRFCYLIYFLMCNELIVVLGKILRNLNILTESMEMNNVINRMSEADMTLLLKHTYQARDFLYQKHHRGGDLNFHAVFSEMEGHKVAPSCYQDNMPSVVTISNQGAESRADAKLGMRSPTWADKSESIPLLGSDIIMNMEELPRRSGYRHLTRGFLTSRPAILMIASVAVCLGVCAVLLHPGRVGEFAASMRSAMTLKVERICKNLSSNKDTDQQLQPVKMVKKLTKGLKMDPLPWFYSALLWLFVVPSLLEIVFSLSNKLLFCPVGYSAPTQATIRGDLKLSLAEVSTLFHVRFFCNHWSNAGAVTSGRIADFMGRKRGSFSLDLGRFFTAYDCYWIISLILNGKYSNLEETGLVWAHASYVLVDWSVLYPRVTQMADWGWNNDLSTIYGNQWTYLIQHWYQRLCLYTGAWMLISKTAYTQLQVSAGGTFLGCFITGIAFLLKIYIAAFSIGMGSVPWVIMSEIFPINVKGIAGSLVVLVTWYFDLVCWIFIGDHSVCGKVGARNQRENT 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0205 1236 MobiDBLite consensus disorder prediction 215 235 - -
Lele22g0205 1236 ProSiteProfiles Zinc finger SBP-type profile. 146 223 IPR004333 GO:0003677
Lele22g0205 1236 Gene3D - 145 210 IPR036893 GO:0003677|GO:0005634
Lele22g0205 1236 SUPERFAMILY SBT domain 147 227 IPR036893 GO:0003677|GO:0005634
Lele22g0205 1236 MobiDBLite consensus disorder prediction 80 99 - -
Lele22g0205 1236 MobiDBLite consensus disorder prediction 13 30 - -
Lele22g0205 1236 Gene3D MFS general substrate transporter like domains 1117 1222 IPR036259 -
Lele22g0205 1236 MobiDBLite consensus disorder prediction 1 48 - -
Lele22g0205 1236 Pfam Sugar (and other) transporter 1121 1217 IPR005828 GO:0016020|GO:0022857|GO:0055085
Lele22g0205 1236 Pfam SBP domain 149 223 IPR004333 GO:0003677
Lele22g0205 1236 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 65 744 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0205 Lele-ChrLele22 1262170 1274704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0205 636 917 SBP-box Gene Family AT5G18830 32.765 2.26e-41 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele22g0205 Sugar_tr 3.2e-08 CL0015