Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0196 ATGAAACTTCTGATAATTCACACGAGTTCCTGCAAGCTAGCTGATCTTCAGTTAAACAAAGAAGTTTCAGATAATGGACCAAGTGGGAGGCGGCCAGATATTTCACTTCAAATCCCACCTAGACATGTAGGGTTAGGAAGTGCTTGCAGTGGAAGGTCTCTGGACCACTCTCAGAGCTTCTCTAGAGGGATTCCATTGCCGCGAGGCTTTTTGCGGGCTTGGAGCTTCAAAAGGAAAGGCAATACAGCAGATGTGGAAAGAAGCAGCCTCCTCAATTCAGATCCCAAGGCAGCTGCAGACAGTCCAAATATGGCCAACTTAACATCTGCAATTTCATGGAAAAGATGTACTTCTCTTCCTGTCACGCCTGCTACAAAACTCTCCCCTTCAGTTTCTACACCTGCTTCTGCAAGGACATACAGTGAACAGCCTAAACGCCATAAAGATGCTGTTGCTGCTGGTTCCAAGGTTTCAAGGTCCCTCTCTGTGCCTGGGCGGAATATGGTTATCGTGAGATCTTTGTCTTTTGCTGCCCGGAGTGAGCATGCACAGCAAGATCAGAATGACAATCAAATAACTCCTGTGCCAGTAGAAGATGCTGATGAAGAAATTCCTGAAGAGGAAGCAGTTTGCAGAATCTGTTATGATGTCTGTGATGAAAGGAACACCCTTAAATTGGAGTGCAGTTGTAAAGGCGACTTGACACTTGTTCATGAAGAATGTGCAATTAAATGGTTTAGCACAAAAGGAAATAAGAAATGTGATGTCTGTGGCCAAGAGGTCCAGAATTTACCTGTAACATTGCTTCGTTTGCCCAGCTCTGTTCAGACAGGAAGGAGACAGGTGCAGGGTCAGCAGAATATGAATCCTGAGAGATTAAGTGCTTGGCAAGACTTCGTGGTGCTTGTCCTAATAAGCACAATATGCTATTTTTTCTTCCTCGAGCAGCTACTGCTTCCTGACATGAAGACTCAAGCAATCATTATATCAGCACCATTTGCCTTTACCCTGGGTCTACTGGCATCTATTTTTGCAGTCATCCTTGCAATAAAAGAGTATATATGGACATATGCTGCTCTCGAGTTTGCTCTTGTGGCTATAACAGTACACGTGTTCTATTCTATGTTGCATTTGAAGGCCCTTTATGCAGTACTGCTTTCATCAGTTCTGGGTTTTGGTATGGCTATGAGCATCAACTATGTATATATCCAGTTTGTTTCTTGGCGTCCTCAAGTCTCCCATGATGCCAACCCAGTATGA 1260 0.4421 MKLLIIHTSSCKLADLQLNKEVSDNGPSGRRPDISLQIPPRHVGLGSACSGRSLDHSQSFSRGIPLPRGFLRAWSFKRKGNTADVERSSLLNSDPKAAADSPNMANLTSAISWKRCTSLPVTPATKLSPSVSTPASARTYSEQPKRHKDAVAAGSKVSRSLSVPGRNMVIVRSLSFAARSEHAQQDQNDNQITPVPVEDADEEIPEEEAVCRICYDVCDERNTLKLECSCKGDLTLVHEECAIKWFSTKGNKKCDVCGQEVQNLPVTLLRLPSSVQTGRRQVQGQQNMNPERLSAWQDFVVLVLISTICYFFFLEQLLLPDMKTQAIIISAPFAFTLGLLASIFAVILAIKEYIWTYAALEFALVAITVHVFYSMLHLKALYAVLLSSVLGFGMAMSINYVYIQFVSWRPQVSHDANPV 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0196 419 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 197 265 IPR013083 -
Lele22g0196 419 SMART ringv_2 210 258 IPR011016 GO:0008270
Lele22g0196 419 SUPERFAMILY RING/U-box 207 261 - -
Lele22g0196 419 CDD RING_CH-C4HC3_MARCH 211 258 - -
Lele22g0196 419 Pfam RING-variant domain 211 257 IPR011016 GO:0008270
Lele22g0196 419 MobiDBLite consensus disorder prediction 123 140 - -
Lele22g0196 419 PANTHER OS02G0165000 PROTEIN 57 414 - -
Lele22g0196 419 MobiDBLite consensus disorder prediction 123 157 - -
Lele22g0196 419 ProSiteProfiles Zinc finger RING-CH-type profile. 203 264 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0196 Lele-ChrLele22 1238527 1242376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0196 224 319 C3H Transcription Factor Family AT5G59000 32.292 6.76e-11 60.1