Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0195 ATGTGGGTTGTGAAGAACCTGCAAATAAGCTCCATTTTTCAAAAAGAAAGAATTATTCCCACAATTTGCGGCCATTTGAATGTTGTACCACTTGCTTTTAGTACATATAGATTTGCTGCAGTTTTCACAATGTCTTCTGCTAGAACAAATGTTGTCACTGAATTTAAGCTCCCAAAAATGCAGGCCGAAACTCCCACTCAGAGAGAGCCCATGTTCCTATTGGTACCTTCTTTCCACAAGCTATGTATGAGAAGAATTGTATTCAAAACAAGAAGTTGGAAGAAGCTTTCGCTTTTGCCTTTGTGTTACTACATCCTTGAACAGAAATACATTGATGTATACCAAATGTGCCCTTATATCCTTTCAATTCCGGCACTTCTTGAACCTTCAACCTCCGGTTTCCTCCGTCCATCTCCTCCGAATTGGTTTATCAGGAGTGCAAATATTGTATTTTGGATTAAATGTAGCTCGTTTTCTAATGCACTTGACCAGAAAGCTTGCTTTGAAGTTTTATTATCTGGGTTTTTGATGGACTGCAATAAAGAAGAGGCCTTACGGGCCAAGGTCATTGCTGAAAAGAAGATGGAAAGTAAAGATTTCATAGGGGCTCGTAAAATTGCTCTTAAAGCTCAGCAACTATATCCTGATCTGGAGAATATAACTCAAATGCTTATTGTATGCGATGTGCATTGCTCTGCTGAGAAGAAATTGTTGGGGAATGAGATGGACTGGTATGGAATTCTTCAAATTGGTCACTCAGCTGATGAGACAATGATAAAAAAACAATACAGGAAGTTTGCCCTCCAACTTCATCCTGACAAGAACAAGTTTTCTGGTGCAGAAGCTGCATTTAAGCTAATTGGGGAAGCCCAAAGAGTACTTTTGGACAAAAATAAACGGGCTCTACTTGACATGAAGTATAAAGTTCCTATGAACAGAACTTCAAAGCCATATCATCCACCACAGAAGGTTAATACAAATGTGAATGTTGGGATGCAAAACAATGTCAGGGCCAAATTTTCCAACATGAATCCTCAGCAGCAGCAGCAACCTAGGCAGTCAACTCAACAGGGGCCCAATGGTAGCCGCCATACGTTTTGGACTGCCTGCCCATTTTGTTCTAGTAGATATGAGGTTCACTCTGAAGCTGTGAATAGATCTGTTTCCTGTCAAACTTGTCATAGGCCCTTTATTGCATACATGCTAGGTACATCAGTAGCGGCGGCGGCGGCTAATTCAAGTCGTCAATCTTTTGGCCAACAAAAAGATGGTTTAAATCATGGCGTTGATGTTGGATCTCAAGGTATGAATGCTGGGAATGTCAATACAAAGCCTTCTGCAAAAAAAGGCCCAAACATCTCTGATAAGCTGCATAGAAAGAGAAAGAGGAAGAAGGTAGAAGAATCTAGTGAAAGTGCTGATTCCTTAGACAGCAATGAGTCTGAAGATGATATGTTTGTTGACAAGGATGGTGTTCCCGGTGAACAAAACTATCCAACTGATCAAGAACAGCATCGGCGTAGATCTGCAAGGTCTAAGCCTCAGGTTGTTTATAATGAGAATGGGAGCGATGATGATGATAACGTTTCAAAGCCCTCAATTGGGGCCAAGGGAAGTGGCTTATGTGGTGCGGAAGAAGACAATGGGGAGACAGCTGAAATGAATAATCGAAATGGCTCGGCTGCGGACCTGAAAGATGACCAGAAAGGGGTGAAACAGAAAGACAATCATTATTCTGAAGAGAGCTTGCACAAGAGAAATGAGGAAACTCTGGACACGAGAGGAAAAGAAGCAAACCAGGGCTCAAAGGGGACCGGAGAAGCAGCAGAAGGTCCAACCTTTTTTGTCTATCCTGATGCAGATTTCAGTGACTTTGAAAAGGACAAGAAAGAAGATAGTTTTGCAAATGGACAGATTTGGGCTATATATGATACAATTGATGGCATGCCGAGATTCTATGCTTTGATCAGGAAAGTTCTCTCTCCTGGATTCAAGCTGCGAATAACATGGTTTGAAGCAGAGCCAGATGACGAGGACGAAATCAGCTGGGTAGAAAATAATCTGCCAGTTGCTTGTGGGAAGTATGTGCTTGGCAACACTGAAATTTCTGAAGATCGTCTTATGTTCTCACATCTGATTTCGTGTGAAAAGATTGGCCGCAGTACTTTCAAAGTTTATCCTAGGAAGGGTGAAACTTGGGCTCTGTTTAAAAATTGGGATATCAAGTGGTACACTGATGTGGAATCTCATCAGATGTATGAATTTGACTATGTTGAAATTTTGTCCGATTATGTTGAAGGAGAGGGGGTGTCTGTTGCATACTTGGAGAAGTTGAAAGGTTTTGTGAGTCTTTTCGCTCGAGCAAACAAGGGCAATGTGGATTCATTTCGAATTCCATCAGCGGAGTTGTTTAGATTCTCTCATAGGATTCCTTCATTTAAAATGACTGGTCAGGAAAGAGTAGGTGTCCCTAAAGGATCTTTTGAACTTGATCCTGCATCTTTGCCGGAAAAACTTGAATAG 2523 0.4138 MWVVKNLQISSIFQKERIIPTICGHLNVVPLAFSTYRFAAVFTMSSARTNVVTEFKLPKMQAETPTQREPMFLLVPSFHKLCMRRIVFKTRSWKKLSLLPLCYYILEQKYIDVYQMCPYILSIPALLEPSTSGFLRPSPPNWFIRSANIVFWIKCSSFSNALDQKACFEVLLSGFLMDCNKEEALRAKVIAEKKMESKDFIGARKIALKAQQLYPDLENITQMLIVCDVHCSAEKKLLGNEMDWYGILQIGHSADETMIKKQYRKFALQLHPDKNKFSGAEAAFKLIGEAQRVLLDKNKRALLDMKYKVPMNRTSKPYHPPQKVNTNVNVGMQNNVRAKFSNMNPQQQQQPRQSTQQGPNGSRHTFWTACPFCSSRYEVHSEAVNRSVSCQTCHRPFIAYMLGTSVAAAAANSSRQSFGQQKDGLNHGVDVGSQGMNAGNVNTKPSAKKGPNISDKLHRKRKRKKVEESSESADSLDSNESEDDMFVDKDGVPGEQNYPTDQEQHRRRSARSKPQVVYNENGSDDDDNVSKPSIGAKGSGLCGAEEDNGETAEMNNRNGSAADLKDDQKGVKQKDNHYSEESLHKRNEETLDTRGKEANQGSKGTGEAAEGPTFFVYPDADFSDFEKDKKEDSFANGQIWAIYDTIDGMPRFYALIRKVLSPGFKLRITWFEAEPDDEDEISWVENNLPVACGKYVLGNTEISEDRLMFSHLISCEKIGRSTFKVYPRKGETWALFKNWDIKWYTDVESHQMYEFDYVEILSDYVEGEGVSVAYLEKLKGFVSLFARANKGNVDSFRIPSAELFRFSHRIPSFKMTGQERVGVPKGSFELDPASLPEKLE 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0195 840 Pfam Domain of unknown function (DUF3444) 615 819 IPR024593 -
Lele22g0195 840 ProSiteProfiles dnaJ domain profile. 243 307 IPR001623 -
Lele22g0195 840 MobiDBLite consensus disorder prediction 433 449 - -
Lele22g0195 840 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 177 840 - -
Lele22g0195 840 Pfam DnaJ domain 243 304 IPR001623 -
Lele22g0195 840 MobiDBLite consensus disorder prediction 418 611 - -
Lele22g0195 840 CDD DnaJ 243 296 IPR001623 -
Lele22g0195 840 SUPERFAMILY Chaperone J-domain 239 311 IPR036869 -
Lele22g0195 840 SMART dnaj_3 242 299 IPR001623 -
Lele22g0195 840 MobiDBLite consensus disorder prediction 342 362 - -
Lele22g0195 840 MobiDBLite consensus disorder prediction 560 596 - -
Lele22g0195 840 PRINTS DnaJ domain signature 263 278 IPR001623 -
Lele22g0195 840 PRINTS DnaJ domain signature 279 299 IPR001623 -
Lele22g0195 840 PRINTS DnaJ domain signature 245 263 IPR001623 -
Lele22g0195 840 Gene3D DnaJ domain 240 365 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0195 Lele-ChrLele22 1228598 1236263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0195 180 399 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.667 2.92e-28 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0195 22 1228598 1236263 Lele23g1857 23 21859366 21863448 hybridization
Lele22g0195 22 1228598 1236263 Lele24g0189 24 1247916 1255424 hybridization