Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0188 ATGGGAAATTCAAAGTTGAAAGAGTTGAGAGAAGAAAAGTTTCAGGATGAACTCATGAACTTAGTCGATTTCAAGGTTTACATACATATGTCGTCAGACCTTTTCACCAATAATGTTGTTTTTCTCCAATCATTTTTTTCAATCTCACGGGATCCTCCTTTCCCACAGAGCTTCAACGCCGTGCCGGTGGAGTACTCTCATCAGTCTCAGTATCCCCTAAGTCACCATCACAATCTCATGACCAAGTTTCGGATCGGAGAAGCCTCCGGAGAAAGCAGTCATCAAATGAATAACAGTGGCATGGTGAATTATATGCTCCACAACCACAACAACGACAACACTCCTCCTCATCAACATCATCAACAACAATCTTGTGGGTTTTATGGTACACCCGCTGGTTCTTCTTTTGATAAGCTGAGTTTCGCAGATGTGATGCAGTTTGCAGATTTCGGACCCAAGTTGGCCTTGAACCAGACCAAGAATAACTGTACCACTGAAGGAGAAGAAGATCAGTCTGGGATGGACCCAGTTTTCTTCCTCAAGTTCCCTGTGTTAAATGAAAGGTCCTTGGAGGATCATCAGAATCTGATGGGGACAGGTGAAGAAGAAGAAGGAGTGATGAGAGAGGATGAAGTAGAAGAAGCTAGGGTTTCTTTTAGTAATAATAGTAATAATAAGTCGGTGCAGCAACATGGGTTTGTAGGAGAAGACATGGAGAAGAATAACAGTAACCCTACAAGCACAGTTCAGGAGAACAACAATAATACAAATAATAAGAGCAAAAGGAAGAGACCCAGAAGCATCAAAACCAGCGAGGAGGTAGAGAGCCAGCGTAAGACTCACATCGCCGTCGAAAGAAACCGTCGGAAGCAAATGAACGAGCACCTTCGTGTCCTCAGATCCCTCATGCCCGGTTCTTACGTCCAAAGGGGGGATCAAGCTTCTATAATAGGAGGAGCGATAGAGTTCGTGAGGGAATTAGAGCAGCTTCTTCAGTGCTTGGAGTCACAGAAGAGAAGAAAGTTACTGGGAGAAGCTCATTCAAGGCAACAAGTTGGGGATTCTTCTTCTGTTGCAATTCAGGCTCAGCAACAATCTCCATATTTTCCAGCTTTGGCGCCTTTGCCAAATGTTGAGTTTGAGAGTGGGCTGAGGGAAGAAACAGCAGAGAACAAGTCATGTTTGGCTGACGTGGAAGTGAAGCTTTTAGGATTTGATGCGATGATCAAGATCCTGCATTGGCAGGTTGCAGGTGATTCAAGGTTCACAGCGGAAGATATAGCCAGCTCTGTCCAACAGATATTCAGTTTCATTCACGAGAACACTGGAATGTAA 1335 0.4419 MGNSKLKELREEKFQDELMNLVDFKVYIHMSSDLFTNNVVFLQSFFSISRDPPFPQSFNAVPVEYSHQSQYPLSHHHNLMTKFRIGEASGESSHQMNNSGMVNYMLHNHNNDNTPPHQHHQQQSCGFYGTPAGSSFDKLSFADVMQFADFGPKLALNQTKNNCTTEGEEDQSGMDPVFFLKFPVLNERSLEDHQNLMGTGEEEEGVMREDEVEEARVSFSNNSNNKSVQQHGFVGEDMEKNNSNPTSTVQENNNNTNNKSKRKRPRSIKTSEEVESQRKTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRKLLGEAHSRQQVGDSSSVAIQAQQQSPYFPALAPLPNVEFESGLREETAENKSCLADVEVKLLGFDAMIKILHWQVAGDSRFTAEDIASSVQQIFSFIHENTGM 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0188 444 CDD bHLH_AtFAMA_like 280 346 - -
Lele22g0188 444 MobiDBLite consensus disorder prediction 196 283 - -
Lele22g0188 444 Pfam Helix-loop-helix DNA-binding domain 277 328 IPR011598 GO:0046983
Lele22g0188 444 Gene3D - 267 342 IPR036638 GO:0046983
Lele22g0188 444 PANTHER TRANSCRIPTION FACTOR FAMA 169 416 IPR044283 GO:0003700|GO:0010052
Lele22g0188 444 MobiDBLite consensus disorder prediction 266 283 - -
Lele22g0188 444 FunFam Basic helix-loop-helix transcription factor 267 342 - -
Lele22g0188 444 MobiDBLite consensus disorder prediction 217 256 - -
Lele22g0188 444 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 276 327 IPR011598 GO:0046983
Lele22g0188 444 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 276 354 IPR036638 GO:0046983
Lele22g0188 444 SMART finulus 282 333 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0188 Lele-ChrLele22 1166660 1169083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0188 85 444 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 50.600 1.80e-106 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele22g0188 HLH 1.1e-09 No_clan