Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0179 ATGGACGACCGAGACTTCCGTCGTCGTAATCGGATGGCACATGCTTCTCCTCCTAATTACTTTGTTCGCTTGGAGAATACAACTTCCAAAGACGATTTATATTTGAGGAAGAGGACTGGGACCGGGATGCGTCGGTGGCTTTGTTGTTCTTCTCATGTTGAAGAGCCTTACCCTTATGAAAACGAGCACCTTAAAAGCCCAAGGAACTATGGAGATGGTAATCCAAAAGGCCCAAAGGCTTCAGCTCCTGTTAAGCCTGAAACACAAAAGGCTGCACCACCTATTGAAGTGCCAGCATTACCTTTAGATGAACTAAAAGAAATGACTGACAACTTTGGGTCAAAGGCATTGATCGGTGAAGGATCTTATGGGAGGGTATATTATGCAACTTTAAACAATGGAAAGGCCGTGGCTGTGAAGAAGCTTGATGTTTCATCAGAACCTGAATCCAATGTTGAGTTTTTGACCCAGGTTTCAACGGTCTCAAGAATGAAGCATGAAAATTTTGTTGAGCTGCATGGTTATTGTGTTGAAGGAAATCTTCGTATACTTGCATATGAGTTTGCAACTATGGGCTCTCTTCATGATATATTGCATGGTAGGAAGGGAGTTCAAGGGGCACAACCAGGGCCAACCCTTGACTGGATGCAACGAGTTCGAATTGCAGTTGATGCGGCAAGGGGGTTGGAATATCTACATGAGAAAGTTCAACCGGCTATCATACATAGAGATATCCGATCAAGCAATGTACTAATTTTTTATGATTACAAAGCAAAGATTGCTGATTTTAATCTTTCGAATCAGGCCCCTGACATGGCTGCACGCCTTCATTCCACTCGAGTGTTGGGAACTTTTGGTTATCATGCTCCAGAGTATGCAATGACTGGTCAGTTGACTCAAAAAAGTGATGTCTACAGTTTTGGTGTTGTTCTTCTTGAGCTTCTTACAGGGAGAAAACCCGTTGACCATACCATGCCTCGAGGACAGCAAAGTCTGGTTACATGGGCTACTCCAAGACTGAGTGAAGATAAAGTCAAACAATGCGTGGATCCAAAACTGAAGGGAGAATATCCTCCTAAAGGAGTTGCAAAGCTGGCAGCTGTTGCAGCACTTTGCGTGCAGTATGAAGCCGAGTTTAGGCCGAATATGAGCATCGTGGTCAAGGCGCTGCAACCACTTCTGAAGGCGCTGCAACCACTTCTGAAGGCTCCTCCTTCTGCTCCAGCACCGGAAACTTGA 1239 0.4487 MDDRDFRRRNRMAHASPPNYFVRLENTTSKDDLYLRKRTGTGMRRWLCCSSHVEEPYPYENEHLKSPRNYGDGNPKGPKASAPVKPETQKAAPPIEVPALPLDELKEMTDNFGSKALIGEGSYGRVYYATLNNGKAVAVKKLDVSSEPESNVEFLTQVSTVSRMKHENFVELHGYCVEGNLRILAYEFATMGSLHDILHGRKGVQGAQPGPTLDWMQRVRIAVDAARGLEYLHEKVQPAIIHRDIRSSNVLIFYDYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKALQPLLKAPPSAPAPET 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0179 412 FunFam PTI1-like tyrosine-protein kinase 3 190 399 - -
Lele22g0179 412 Gene3D Phosphorylase Kinase; domain 1 84 188 - -
Lele22g0179 412 MobiDBLite consensus disorder prediction 60 91 - -
Lele22g0179 412 FunFam PTI1-like tyrosine-protein kinase 3 76 188 - -
Lele22g0179 412 SMART tyrkin_6 112 390 IPR020635 GO:0004713|GO:0006468
Lele22g0179 412 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 46 398 - -
Lele22g0179 412 ProSiteProfiles Protein kinase domain profile. 112 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0179 412 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Lele22g0179 412 ProSitePatterns Tyrosine protein kinases specific active-site signature. 240 252 IPR008266 GO:0004672|GO:0006468
Lele22g0179 412 Pfam Protein tyrosine and serine/threonine kinase 117 390 IPR001245 GO:0004672|GO:0006468
Lele22g0179 412 Gene3D Transferase(Phosphotransferase) domain 1 190 400 - -
Lele22g0179 412 SUPERFAMILY Protein kinase-like (PK-like) 93 390 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0179 Lele-ChrLele22 1101400 1104691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0179 47 398 Receptor kinase-like Gene Family AT4G02010 44.507 2.66e-90 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lele22g0179 PK_Tyr_Ser-Thr 2.3e-46 CL0016