Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0145 ATGTCACAGTCAGATCAATCTTCGGTTTTCGAAACGCCCAGATTGGTTCACAAGAAGGTGTTGGCCAATTCTCAACATGAAGGTGATGGTGCTGTTGTCAAAAGAGCCTTCGGAAGGAGCGAGTTGAAGAGTTTGGATCCCTTTCTGATGATGGATCACTTCTCAGTGTCTCCACCTGGAGGTTTCCCTGACCATCCACACAGAGGTTTTGAAACTGTCACATACATGCTGCTGGGAGCCATAACTCATCAAGATTTTGCCGGGCATAAGGGTACAATCCGAACAGGTGATGTTCAGTGGATGACCGCAGGCAGAGGAATAATTCACTCTGAAATGCCTGGAGGAGAAGGAACGCACAAGGGATTGCAGCTATGGATCAATTTATCGTCCAAAGATAAGATGATTGAACCAAATTATCAAGAACTTCCAAAAGAGGACATACCAGAAGCAGAACAAGATGGGGTTGAAGTGAGGGTTATAGCAGGAGAAGCAATGGGAGTTCATTCACCAGTTTACACCAGAACCCCAACCATGTTCCTTGATTTCACTCTCAGCCCAGGAGCTGAATGGCATCAGAACATTCCAGAATCATGGAACGCCTTTGTTTATGTGATTGAAGGAGAAGGGGTTTTTGGGTCTGCAAGTTCTTCACCAGTGGCGGCTCACCATGTGCTGGTCTTGACCCTTGGAGATGGTCTAAGTTTCTGGAACAGATCTTCAAAGCCTCTTAGGTTTGTGTTGATTGCAGGGCAGCCACTGAATGAACCAGTGGTTCAGTATGGTCCCTTTGTGATGAACACGCAGTCTGAGATTGAAAAGACCATAGAGGACTATCAATATTGCAAGAATGGGTTTGAGATGGGGAGATATTGGAGATCTCAACAGTAA 888 0.4572 MSQSDQSSVFETPRLVHKKVLANSQHEGDGAVVKRAFGRSELKSLDPFLMMDHFSVSPPGGFPDHPHRGFETVTYMLLGAITHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPGGEGTHKGLQLWINLSSKDKMIEPNYQELPKEDIPEAEQDGVEVRVIAGEAMGVHSPVYTRTPTMFLDFTLSPGAEWHQNIPESWNAFVYVIEGEGVFGSASSSPVAAHHVLVLTLGDGLSFWNRSSKPLRFVLIAGQPLNEPVVQYGPFVMNTQSEIEKTIEDYQYCKNGFEMGRYWRSQQ 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0145 295 FunFam pirin 27 164 - -
Lele22g0145 295 CDD cupin_pirin_N 31 128 - -
Lele22g0145 295 Gene3D Jelly Rolls 27 279 IPR014710 -
Lele22g0145 295 PANTHER PIRIN-RELATED 1 294 IPR012093 -
Lele22g0145 295 Gene3D Jelly Rolls 148 253 IPR014710 -
Lele22g0145 295 Pfam Pirin 33 126 IPR003829 -
Lele22g0145 295 SUPERFAMILY RmlC-like cupins 14 292 IPR011051 -
Lele22g0145 295 PIRSF Pirin 12 292 IPR012093 -
Lele22g0145 295 Pfam Pirin C-terminal cupin domain 179 284 IPR008778 -
Lele22g0145 295 CDD cupin_pirin_C 176 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0145 Lele-ChrLele22 850181 851764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0145 12 289 Calmodulin-binding Proteins AT3G59220 63.571 7.73e-130 369