Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0143 ATGGTGAACCTCATGGACTGGCAGAAGCAGCAGCAGCAGCAGCAACAGCAGAGTGGGAATGCCAACAATGGAAACGGAGGAATGATGTACGTGAAGGTCATGACCGATGACCAACTGGAAACTCTCCGGGAGCAAATCGCTCTCTATACCTCCATTTGCGAGCAGCTCGTTGAGATGCACAAGACTCTCACCGCTCAGCAGGATCTTGCAGGAGTTAGGCTGGGAAATATATACTGTGACCCATTGATGACTTCTGCTGGGCACAAAATAACTTCCAGACAGAGGTGGACTCCAACGCCTGTGCAACTTCAAATTCTTGAGCGTTTATTTGATCAGGGGAACGGAACTCCAAGCAAGCAAAAGATCAAGGAGATTACTGCTGAACTCAGCCAGCATGGCCAGATTTCTGAAACAAATGTGTATAATTGGTTCCAGAATAGGCGTGCTCGATCAAAAAGAAAGCAGCAAAATGTGGCTCCTAATAACGCTGAATCTGAAGTGGAGACTGAAGCTGAATCTTCCAAGGATAAGAAAACAAAACCCGAGGAGTTTCAGTCCCAACATAGTGCATCAACTAGGGCTGAAGATTTGTGCTTCCAGAATCATGAAGTGTGCTCTGACTTGCACTACTTGACTCCAGAGTCCTGTAAACCAGAATCCATGTTTCCATCAGATGGCAGTCTGAAAAATACAAGAAGTTTCGGCCAAATGTCTGTTTTTGATGGAATGCTATCAAACTCGAGGGATGGCTATATTACTGGAAAAATGCAAGTGCCAGGAAGCTACAATTTATACCAGCAACCTGGGGACTACAACATGACGGATGATGCTCATTTTATCCAGAAGCAGTTCCAGAATGCCTTACTAATGGGTAACTCGTGTTTCTTCCTACAACCAGATTGGGTTCAAAGATATGGTGCAAAAATTGAGTTGCATCACCTATCCTCAAAGAACACAACCTCTTAGTCTAGCGTTGAAGACTCGAATGATTTCATGCTATTTCTATTCGAGGTTCAAGATGGGTGGGCTTCTCAATATCACAATTTGAGATTCTATTCTATAAAGGAAGGTACGTGGAAGTCCATTGAAGCGAGCTTCTTCCCTGGTGCAAGACCGCTGAGATTTGACATGCATATTTATTATAGAAAAACACTCCACTTCATATCAGATTGCTCTGCTTTTCTTAGCAAGAAGAGCCATTATTTCAGGCCATATGTAATGGCTTACAATGTTGAAGATTGGAGCTCAAGAATGCTTAGGGTCCCTAAAGAAGATAGACTTGGTTCTCATGACTTGACCGGCCAAATGGGCATTTATAAATGGGGGAAATCAACAGATACGCTTCGTGCCTGTGGAGACGATGCTAAAGCATTGCCATTATTGTGA 1386 0.4372 MVNLMDWQKQQQQQQQQSGNANNGNGGMMYVKVMTDDQLETLREQIALYTSICEQLVEMHKTLTAQQDLAGVRLGNIYCDPLMTSAGHKITSRQRWTPTPVQLQILERLFDQGNGTPSKQKIKEITAELSQHGQISETNVYNWFQNRRARSKRKQQNVAPNNAESEVETEAESSKDKKTKPEEFQSQHSASTRAEDLCFQNHEVCSDLHYLTPESCKPESMFPSDGSLKNTRSFGQMSVFDGMLSNSRDGYITGKMQVPGSYNLYQQPGDYNMTDDAHFIQKQFQNALLMGNSCFFLQPDWVQRYGAKIELHHLSSKNTTSXSSVEDSNDFMLFLFEVQDGWASQYHNLRFYSIKEGTWKSIEASFFPGARPLRFDMHIYYRKTLHFISDCSAFLSKKSHYFRPYVMAYNVEDWSSRMLRVPKEDRLGSHDLTGQMGIYKWGKSTDTLRACGDDAKALPLL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0143 461 MobiDBLite consensus disorder prediction 8 28 - -
Lele22g0143 461 MobiDBLite consensus disorder prediction 168 184 - -
Lele22g0143 461 PANTHER WUSCHEL-RELATED HOMEOBOX 13 5 273 IPR044559 GO:0003700
Lele22g0143 461 MobiDBLite consensus disorder prediction 151 189 - -
Lele22g0143 461 SMART HOX_1 91 158 IPR001356 GO:0003677
Lele22g0143 461 Pfam Homeodomain 93 153 IPR001356 GO:0003677
Lele22g0143 461 Gene3D - 95 159 - -
Lele22g0143 461 CDD homeodomain 93 155 IPR001356 GO:0003677
Lele22g0143 461 SUPERFAMILY Homeodomain-like 91 156 IPR009057 -
Lele22g0143 461 MobiDBLite consensus disorder prediction 8 25 - -
Lele22g0143 461 ProSiteProfiles 'Homeobox' domain profile. 89 154 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0143 Lele-ChrLele22 833404 838082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0143 4 274 Wox Gene Family AT4G35550 50.168 9.94e-87 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele22g0143 Homeodomain 1.7e-18 CL0123