Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0142 ATGTACCCTTCTTCCTCATCGTCCTCCTCCCAGTCCCAAAGCGGCTTAACCCGCTACGGTTCCGCCCCCGGCTCTCTCCTCACCAACGCCGTCGATGCTGTTATCGGAGAAGCTGACCGCGAATTCTCCACTACTGCCGTCGGATCACGCCCTCCGGTGACCCATTTCTTCCGTGGCGAATCCTCCGAATCCTCCTGCAAGGTCAACTCATCCTCCGATCCAAAAGACAATCCTCCCAGGCTCGGATTGCAGAGATCCTACGGTCTCCATGACGGAGCCTCCATCGGCTTCGGCATCTCATCTTCGGCTTTGCTTCGTCAGAGAAGCTCGCCAGCTGGCTTCCTCAGCCATCTCACTGCTACTCCACCTGATAATGGAGGTTTCTCAATTTCAAGGGGCAGTGGAAGCTATAGCGCACAAGGCGCCTCCAATAGTGGCCATGGAATATCAACGCTAAAATCTCAATTGAGCTTCATTGGGCAAGAATCTCTTTCTCAGATATCGGAGGTGAACGAGCATGTTGATGGAATCAATTCTGACAATGGCCACCATAGATCTTCACATTCTTATGCCACAACCAGCTTTGGAATTGACACCTGGGATGGTTCAAACTCCATTGTGTTCTCTGCTCCCTCTAGTAAACGTGCTAAAAATATAGATGGAGACATTCTGAACTGTCTTAGTGCCTTGGACTCCCAGTTTAGTCTGCCACAAACTACTCTGGAAATGGCAACAGTGGAGAAGCTACTTCATATTCCTGAAGATTCTGTCCCCTGTAAAATTCGTGCTAAGCGAGGCTGTGCTACTCATCCAAGAAGCATTGCAGAACGGGAGAGAAGAACTAGAATTAGTGGGAAGTTGAAGAAGTTGCAAGAGCTGGTACCTAATATGGACAAGCAAACAAGCTACGCGGACATGCTGGATTTGGCTGTTCAACATATCAAAGGTCTACAAACTCAAGTTCAGGTGTGTGAATATACCAAAAGCTCCACAAAGAACACGAGAATTGCACCTGTGGATGTAAACAAAGCTCATAGCATTTGTTTTGACAAGAAGCTGCGGCCGAAGAAAGTGGATAGAGTTCACGAATTCTGA 1095 0.4849 MYPSSSSSSSQSQSGLTRYGSAPGSLLTNAVDAVIGEADREFSTTAVGSRPPVTHFFRGESSESSCKVNSSSDPKDNPPRLGLQRSYGLHDGASIGFGISSSALLRQRSSPAGFLSHLTATPPDNGGFSISRGSGSYSAQGASNSGHGISTLKSQLSFIGQESLSQISEVNEHVDGINSDNGHHRSSHSYATTSFGIDTWDGSNSIVFSAPSSKRAKNIDGDILNCLSALDSQFSLPQTTLEMATVEKLLHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVQHIKGLQTQVQVCEYTKSSTKNTRIAPVDVNKAHSICFDKKLRPKKVDRVHEF 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0142 364 MobiDBLite consensus disorder prediction 1 24 - -
Lele22g0142 364 SMART finulus 273 323 IPR011598 GO:0046983
Lele22g0142 364 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 267 317 IPR011598 GO:0046983
Lele22g0142 364 Pfam Helix-loop-helix DNA-binding domain 272 318 IPR011598 GO:0046983
Lele22g0142 364 MobiDBLite consensus disorder prediction 125 145 - -
Lele22g0142 364 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 270 329 IPR036638 GO:0046983
Lele22g0142 364 MobiDBLite consensus disorder prediction 58 77 - -
Lele22g0142 364 CDD bHLH_AtbHLH_like 272 323 IPR045239 -
Lele22g0142 364 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 22 329 - -
Lele22g0142 364 Gene3D - 264 329 IPR036638 GO:0046983
Lele22g0142 364 MobiDBLite consensus disorder prediction 42 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0142 Lele-ChrLele22 826738 832429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0142 15 322 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05805 50.581 2.09e-85 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele22g0142 HLH 5.1e-09 No_clan