Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0125 ATGGCATTGTGCCTTCAATCTTCTCTCAGCAATGATAGGCTAGTTACTTCCCTGAATTCCAACTTTCTTTCCGGTGAAATTCCGATGTCCTTTCCCATTAGCAGTAACCTAAGAAACAGTTACTGCCTAGGCAATGTTTCTGTTTCAGTTTCTTGTTCCTCTGTCAAACTTGTGCGGGACAGGTCTCTTGACAGGCATGTTGTTATAAAGAATAAAATTCGGTTTGTTCAAAAACTGATTACTTTACTTCTTTCTAAGCCAAAACACTATCTTCCACTTCACATTCTGACAAAATGCCGGTCATATCTAAATCTTTATTCACCCCGTTCTCTACTTGCTATGATCCATCGCTATCCATCCATCTTTGAATTCTTCACTATCCCATATCCTCCAACGCCACTTAATGCTACCAAGCCGTATCCTCAACTCTGTGTTCGTCTAACTCCAGCTGCTGCATCTCTTGCTGCTGAGGAATTGAGTCTCAAGGATGCTGTTTCCACCACCTTGGCAATTAAACTCCAGAAACTTCTTATGCTATCTTCTCATCGTCGGCTCGTTTTGTCAAAGTTGGTTCACCTAGCTCCGGATCTTGGCCTTCCTCCTAATTTTCGATCCAGGCTGTGCAATGACCGCCCAGATAGATTCAAAACTGTTGACACTTCCTATGGTCGTGCACTTGAGCTTGTATCCTGGGACTCCAGCTTGGCGCAGTCTTTGCCATCTCCTACATTCCACTCTAATAATTTAATAGTTGACAGACCTTTGAAGTTTAAGCAATTGAGACTTCGAAAGGGGCTTAATTTAAAGAGACGCCACCAGGATTTTTTGATAAAATTTGAAGAAATGCCTAAAGTGTGTCCTTATAGGACCCCTTTTGAAAGTCTGGAAAAGGAATCGGTCGAGGCAGAGAGGAGATCGTGTGCTGTAGTAAGAGAGGTTCTTGGAATGATGGTTGAAAAGAGGACTTTGGTAGATCACTTGACCCATTTCAGGAAGGAGTTTGGGCTCCCAAACAAGTTGAGAGGGATGATCCTGAGGCACCCAGAGTTATTTTATGTTAGTTTAAAAGGACAGAGGGATTCTGTGTTCCTAGTTGAGGAGTTTGATGAGAAGGGTGACCAATTGGAGAAGGATAAGCTTTTGATATCACAAGATCAATGGATGGCGTTGGCCAGGGAATCCAAAAGAATGAAATGGGAAAGAAGAAAGTCTAGGATTAACAAGGATGTTGGTCGTGTCAGTGCTAGGGATGATTTTGATACGGATGAGGACGACAACGATGATGACGATGATTATGAGATTGATAACTTCAAAAATGGCTATGATGATGGTTTTGAGGATTTATTCGAGGATTTGGATTTTGATGATGATGATGAAGACGACAAAAACAAATTTTTTGGCCGAAATAAGAATGGTGAGTTTTGGACTGCTGGATCTTCTAGTCAAAGGGGTTTGGAAGGAGCACCATTGCAACCCTGGGGTTCACCCTGGCAGACAGATTCCCCCTGCTTGGAGAGCTTGTATCTTAGGACGTTCCAAACATGGCTAACAGTGCCTATGGCTAAGTCCTTCCTCCAAGTGGCGGCAACTGAGGAGGCTGCGCCCCCACTTCGAGCGATCCAGATGGAAGGATTGGTTATCTTGAAGATAATTAAACATTGTAAGGACCATTCACCTACATTAGTCACCGGACAACTTCTTGGGCTTGATGTTGGTAGTGTCCTTGAAGTTACTAACTGTTTCCCCTTTCCGATAAGGGAAGAAGATGAGGAAATCGAGGCTGATGGTGCCAATTACCAGCTTGAAATGATGAGATGCTTGAGGGAGGTTAATGTTGACAATAATACTGTTGGATGGTACCAATCTACATTGCTAGGTTCCTTTCAGACTGTGGAGCTAATTGAAACTTTCATGAATTACCAGGAGAACATAAGACGCTGTGTTTGCATAATATATGATCCATCAAGGTCTGATCAAGGTGTCCTAGCTCTGAAGGCCTTGAAGCTCTCTGACTCATTCATGGAACTCTATCGCAGCAACAATATTACAGGGGAGAAACTGAGGGAGAAAAACTTGTCATGGGTAGATATCTTCGAGGAGATACCTATAAAAGTTTCAAATTCAGCCCTTATCAGTGCCTTTATGACTGAGCTGGAACCTGATACGCCAGTAACCCAGTGTGATTATGATCGTCTCCAATTGTCAACTAGTTCGTTAATGGAGAGGAATATGGAGTTTTTGATTGAATGCATGGACGATTTGTCAATTGAACAACAGAAGTTTCAATTTTACTACCGGAGTTTGTCACGCCAGCAGGCCCAGCAGCAAGCTTGGCTTCAGAAGAGGAGGGCGGAAAATATGGCGCGTAAAGCTGCTGGAGACGACCCATTGCCTGAGGAAGATCCAACGAACCCCGTTTTCAAGCCAATCCCTGAGCCATCGCGATTGGACAGCTTCCTCATAACAAATCAAATTGCAAACTACTGCAACCAAATTAATGGTGTATCAGGGCAGAGCTTCAACAGACTCTATTTGATGAAGGCTCTACGGGACGATTGA 2559 0.4334 MALCLQSSLSNDRLVTSLNSNFLSGEIPMSFPISSNLRNSYCLGNVSVSVSCSSVKLVRDRSLDRHVVIKNKIRFVQKLITLLLSKPKHYLPLHILTKCRSYLNLYSPRSLLAMIHRYPSIFEFFTIPYPPTPLNATKPYPQLCVRLTPAAASLAAEELSLKDAVSTTLAIKLQKLLMLSSHRRLVLSKLVHLAPDLGLPPNFRSRLCNDRPDRFKTVDTSYGRALELVSWDSSLAQSLPSPTFHSNNLIVDRPLKFKQLRLRKGLNLKRRHQDFLIKFEEMPKVCPYRTPFESLEKESVEAERRSCAVVREVLGMMVEKRTLVDHLTHFRKEFGLPNKLRGMILRHPELFYVSLKGQRDSVFLVEEFDEKGDQLEKDKLLISQDQWMALARESKRMKWERRKSRINKDVGRVSARDDFDTDEDDNDDDDDYEIDNFKNGYDDGFEDLFEDLDFDDDDEDDKNKFFGRNKNGEFWTAGSSSQRGLEGAPLQPWGSPWQTDSPCLESLYLRTFQTWLTVPMAKSFLQVAATEEAAPPLRAIQMEGLVILKIIKHCKDHSPTLVTGQLLGLDVGSVLEVTNCFPFPIREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIETFMNYQENIRRCVCIIYDPSRSDQGVLALKALKLSDSFMELYRSNNITGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEPDTPVTQCDYDRLQLSTSSLMERNMEFLIECMDDLSIEQQKFQFYYRSLSRQQAQQQAWLQKRRAENMARKAAGDDPLPEEDPTNPVFKPIPEPSRLDSFLITNQIANYCNQINGVSGQSFNRLYLMKALRDD 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0125 852 SMART pad1_6 539 672 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lele22g0125 852 FunFam Eukaryotic translation initiation factor 3 subunit H 519 728 - -
Lele22g0125 852 Pfam C-terminal region of eIF3h 659 850 IPR045810 -
Lele22g0125 852 MobiDBLite consensus disorder prediction 784 809 - -
Lele22g0125 852 CDD MPN_eIF3h 538 801 IPR027524 GO:0003743|GO:0005737|GO:0005852
Lele22g0125 852 Gene3D Cytidine Deaminase, domain 2 517 728 - -
Lele22g0125 852 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 52 426 IPR045040 GO:0003723
Lele22g0125 852 Hamap Eukaryotic translation initiation factor 3 subunit H [EIF3H]. 535 852 IPR027524 GO:0003743|GO:0005737|GO:0005852
Lele22g0125 852 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 538 641 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lele22g0125 852 Pfam Plant organelle RNA recognition domain 58 396 IPR021099 GO:0003723
Lele22g0125 852 ProSiteProfiles MPN domain profile. 540 673 IPR037518 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0125 Lele-ChrLele22 717680 725173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0125 603 852 Eukaryotic Initiation Factors Gene Family AT1G10840 82.400 3.80e-147 431