Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0123 ATGTTGAAATCTGTTAAGCAAAGCCTTATGAACCTTGGATCAAAGTTTCTGCAGAAGAATCAACCAGAGAATGGTGTTCAGTGGCCAAAGTGCAACGTCTGCTTAGAGCTCACCAACCAATACTGTAACTGTGGAGGCCACGCCATTATTAACGAGGATGAAAACACAGCTGATTCTGAACCCGCTAGTTCTTTTACTCATTCTGTCATCAATATGGTTGGCATGCTCACAGGTTTGGGGCAATTATCGGCGTCATATGCTGTAGAAGAGGGAGGGTGGGCATGTGCAGTAATATTCCTGATGGGCCTTGCAATAACGTGTGCTTATAGCTGTCGACTTCTTGGGAAATGCATGGACAAGAACCCTAAGCTACGAAGCTACGTAGACATTGGTGAACAAGCCTTCGGAACTAAAGGAAGAATGCTGGCTTCGACCCTCATCTACACTGAGATCTTCATGGCCCTTGTCTCCTACACCATCTCACTGCACGACAACCTCTTCACTGTCTTCATGGGATCTCATCATCTCAACCATTTGCGTCTTCCTAAGTTACTGTCTCCTTCTCAGCTTCTCACTGTTCTCGCTGTTCTCATTTCCATGCCTAGCTTGTGGCTCACAGACCTTTCCACCATCTCTTTCCTTTCCACTGCTGGTGTTCTCATGTCTCTCGTTATTTTCCTGTCTGTCGCTGCCACTCCCATTTTCGGAGGCGTTAAGGTTAACCACCACATTCCACTTCTTCAGATCCATAACGTCCCTTCTGTTTCTGGCCTCTTCATCTACAGCTATGGCGGACACGTCGTCTTCCCTGATCTCTATAAATCCATGAAGGACCCCTCCAAGTTCACCAAGGTCATAATAGTGAGCTTCTCCATTGCCACACTGCTGTTTACGACGATGGGATTCATGGGGGCGAAGATGTTCGGGGCACAAGTGAAGTCGCAGATCACTCTGAGCATGCCGGAGAATTTCATAGTGACGAAGATTGCAGTGTGGGCGACAGTGATAACACCAATGACTAAATATGCTCTTGAGTTCGCGCCAATTGCTATTCAGCTACAGCACAGGCTTCCCAGTTCAATGAGTAACAGAAGCAAGAAGATGATAAGAGGCACAGTGGGTTCGGTGCTGCTCTTGGTCATTCTAGCACTGGCTCTGTCTCTGCCGTATTTTGAGGATGTTCTTAGTCTCACTGGTTCACTTTTGACTGTTTTCATAAGCTTGATATTTCCATGTGTTTTCTACACGAAGATCTGGTGGGGACAAATATCAAACACTGTCTTAGTGTTCAACTTGTGTCTCATCACTTTAGGGCTTCTTCTTGGAGTTATGGGCACCATTTCTTCCTCAAGGTCACTGCTCAATAATCTTCAGGCTCATCATCACTGA 1389 0.4622 MLKSVKQSLMNLGSKFLQKNQPENGVQWPKCNVCLELTNQYCNCGGHAIINEDENTADSEPASSFTHSVINMVGMLTGLGQLSASYAVEEGGWACAVIFLMGLAITCAYSCRLLGKCMDKNPKLRSYVDIGEQAFGTKGRMLASTLIYTEIFMALVSYTISLHDNLFTVFMGSHHLNHLRLPKLLSPSQLLTVLAVLISMPSLWLTDLSTISFLSTAGVLMSLVIFLSVAATPIFGGVKVNHHIPLLQIHNVPSVSGLFIYSYGGHVVFPDLYKSMKDPSKFTKVIIVSFSIATLLFTTMGFMGAKMFGAQVKSQITLSMPENFIVTKIAVWATVITPMTKYALEFAPIAIQLQHRLPSSMSNRSKKMIRGTVGSVLLLVILALALSLPYFEDVLSLTGSLLTVFISLIFPCVFYTKIWWGQISNTVLVFNLCLITLGLLLGVMGTISSSRSLLNNLQAHHH 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0123 462 PANTHER AMINO ACID TRANSPORTER 54 441 - -
Lele22g0123 462 Pfam Transmembrane amino acid transporter protein 63 447 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0123 Lele-ChrLele22 707421 709010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0123 31 461 Amino Acid or Auxin Permease AAAP Family AT5G16740 54.292 2.17e-148 428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0123 22 707421 709010 Lele24g0113 24 722136 723731 hybridization