Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0076 ATGTTGCCTGTTTGCTCAGCCACCCCAAGCTATTCATTATCTTCCCAGATTCCACTGTATGGGGGATCCGTGTATCCATTGCAGAAGGATTTTGAAGGTAGATGCATTATGTATGACGTACATCTAGGTTTGCAAAATGGAACCCACTCCCTGAGGAATCCATTTATTGCACAAGCTACAAAGTCTGTCTACTCTAGCGTTGCTAATAGCGCTGAACAATCGGTATATGTGGATTTCCCTGGCAGATTCTCCTCTCCAAATGAACCAGGACACCTTGAGTGCAAATTTGCAGACACTTGGAATTGTTCACCAGTGACAACAAGTGGACACCATTCACTTGCTAGGGGAGAACTCATATATGTTGAAAATTATGATTCATCATCTGTCCCAGAGAGATTGATGGACCTAACTGAACAGTCAACTGAAGGATCAGATGCTTTATTAAGTACTGACATTGTGTCAGAGAAGCTCATCCCTACGCCTGAATCGATTATAGTAGACAATGAATCATTAGGCACCACAAAAGAAAGTATTGGTGATACTTTTTCTGGGATTAGCAAGTCATTTAATGCATCAATTAGTGAGGGAGAAAATGCTTTACAAAGTTCACTTGATACGGCCACTTCTTTGATGAGATCTGTCATTGAGAATGCTACTAAATCTGTTGACAATGCTTTTGGTGAAGCCCTTTCTTCTGTCAATCAATCAGGGGAATTAGCTAATGAGAAATTGACTAGCTTTTCAAATGATCTAAGCGGAATCACAAGCAAAGTACCTGCTTTTGCTATCGATGTGTTGCGAAGCACGATCATAGCAGTAGATAGTTCGTTAATAAGTGGGGCTTCCTATGTTTTCTACCTATATAGTTCAGCCAAGGAGCTTCTTCCTGCAGAAATCATGGATGCAGTAAATGCATATGAATCTAAAGCTTCTCAAATATTGAGGCCGATTGGCTCTGCATCTCAAGAGATATTTACAATAATTTATTCATTGGAGAAGAGTCTAGGCTTGAATCCAGATGATCCAATTGTTCCATTTGTTGTTTTTGTGGGCTCTTCAGCCACAATATGGGCTGTCTATCGGCGGTGGACATATGGAGGTTACTCTGGAGATTTATCTCCTAAATCAGCTCTGGAACTCTTGTCTGGGAATAAAAATGCTGCACTTATAGATATCCGAAATGAGGATCTGAGAGAAAAAGATGGTATTCCCGATCTTCGGCGGGCTGCACGGTTTCGCTATGCGAGTGTAACTCCGCTAGAGGTTGATGGTTCTATTAGAAAGTTGTTCAAGAGTGAACGAGACCTTAATGACTCCATGATCGCTGTTGTCATTCGAAATTTGAAGATTGTTAAGGACAGTTCAAAGGTTATAGTCATGGATGCTGTTGGTGTTCGTTCTAAAGGCATTGCAAGATCCTTGAGGAAAATTGGGGTCAAGACTCCATACTTGGTTCAAGGTGGCTTTGAGTCTTGGGTGAAACATGGCCTCCGCGTCAAGGAACTCAAACCTGAGACAACACTTACCTTACTCAATGAGGAAGCTGAAGCAATTCTAGAGGATCTTAGCCCTTCTCCTTTGCAACTTTTAGGATATGGTGTGGCTGTTATTGCAGGGTCGTACGCATTATTAGAGTGGGAGAAGACATTACAATTAATTGGTGTTTTTGGCCTCAGCCTGACAATCTATCAGAGGGTGACCTCATATGAGAATTCTGAAGATCTTAAGCAAGATGTCAGGTTGTTGCTTACACCTGTGAGACTGGGAGCTCAAGCGGTTTCATGGATTTCTGGAAAAGTAGAAACGAACCGCATAGGGCTGCCTACTTCGCCTTCATCATTAGATGTTCAGAACCGAGTTTTGCAGGCGGCTGCAAAGCATGAATCTCAGCCGTCGGATGCCGAAAGAATCCAAGATTCACCTGTTACTGAACCATCACTTCCTCTCAATGAGAATGCATGA 1962 0.4225 MLPVCSATPSYSLSSQIPLYGGSVYPLQKDFEGRCIMYDVHLGLQNGTHSLRNPFIAQATKSVYSSVANSAEQSVYVDFPGRFSSPNEPGHLECKFADTWNCSPVTTSGHHSLARGELIYVENYDSSSVPERLMDLTEQSTEGSDALLSTDIVSEKLIPTPESIIVDNESLGTTKESIGDTFSGISKSFNASISEGENALQSSLDTATSLMRSVIENATKSVDNAFGEALSSVNQSGELANEKLTSFSNDLSGITSKVPAFAIDVLRSTIIAVDSSLISGASYVFYLYSSAKELLPAEIMDAVNAYESKASQILRPIGSASQEIFTIIYSLEKSLGLNPDDPIVPFVVFVGSSATIWAVYRRWTYGGYSGDLSPKSALELLSGNKNAALIDIRNEDLREKDGIPDLRRAARFRYASVTPLEVDGSIRKLFKSERDLNDSMIAVVIRNLKIVKDSSKVIVMDAVGVRSKGIARSLRKIGVKTPYLVQGGFESWVKHGLRVKELKPETTLTLLNEEAEAILEDLSPSPLQLLGYGVAVIAGSYALLEWEKTLQLIGVFGLSLTIYQRVTSYENSEDLKQDVRLLLTPVRLGAQAVSWISGKVETNRIGLPTSPSSLDVQNRVLQAAAKHESQPSDAERIQDSPVTEPSLPLNENA 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0076 653 CDD RHOD 378 493 - -
Lele22g0076 653 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 368 500 IPR036873 -
Lele22g0076 653 MobiDBLite consensus disorder prediction 635 653 - -
Lele22g0076 653 Gene3D - 368 508 IPR036873 -
Lele22g0076 653 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 1 641 IPR044690 GO:0009704|GO:0071277|GO:0090333
Lele22g0076 653 MobiDBLite consensus disorder prediction 622 653 - -
Lele22g0076 653 ProSiteProfiles Rhodanese domain profile. 383 501 IPR001763 -
Lele22g0076 653 SMART rhod_4 373 498 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0076 Lele-ChrLele22 458660 463612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0076 345 462 Sulfurtransferasese or Rhodanese AT5G23060 30.159 1.40e-10 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0076 22 458660 463612 Lele23g1977 23 22651501 22662432 hybridization
Lele22g0076 22 458660 463612 Lele24g0072 24 476615 481806 hybridization