Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0075 ATGTTGCACAATCAGAGTGACATGGAGGCAAGATTATGGCAGCCCAACGTGGTGGATAATGACGGCATTGACGAAGATACTGATAAGGATGAGGATAGGGATGATGGTCTGGTTACTGGACAGAGGAGGCGTGAGAAGTTGGAATTAAAGAGTTCCAGTTCCAGAAATCACAGTCACTCTAATAAGAGGAGGAAACAGAAAGCAAGATTGAGACGTTCACGAACAGAAATGCGCTGCTATGTCTTGACTATTCCCGGAAGCGATTATCGCTTCTTCTCCTCAACACCCTTATCTGTCCCCGCCACCAACACTTTCAGTCACAAATCTCTCCATTTCCCCTCTCGAACCGGCGGTTTCGTCTCTCTCAGAGTTAAAGCCGCCGTCAACGACGGCTATGTGGCTGAGGCCTCCAAGTTGAGCTTCTACGAGCTTCTGGGTATACCCGAATCTGGGTCCTTGCTCGAGATCAAGCAGGCTTACAAGCAGCTCGCGCGCAAGTACCACCCTGATGTGTCGCCGCCAGATCGGGTGAAGGAGTATACTAAAAGGTTCATTCAGGTGCAGGAGGCCTATGAGACCTTGTCTGATCCTCGAAGGAGGGCTATGTATGATAGAGACATGGCCAGAGGGATTCACTTCGCCTTCTCCGCTCGCCGGCGCTACTACGACGATGAGGTGATTGAACAAAAAAGTGAGTGGAAAGCTCGTTGGCAAAGTCAGCTCTCAGAGCTGAAGAGAAGAAGCAAGGTCAAGCACAATGGAGAAAATCTATCATGGGCAGCTCAAATGCGTCGTCGAAGAGCAGAATCATGTAACGACTCGTAA 825 0.497 MLHNQSDMEARLWQPNVVDNDGIDEDTDKDEDRDDGLVTGQRRREKLELKSSSSRNHSHSNKRRKQKARLRRSRTEMRCYVLTIPGSDYRFFSSTPLSVPATNTFSHKSLHFPSRTGGFVSLRVKAAVNDGYVAEASKLSFYELLGIPESGSLLEIKQAYKQLARKYHPDVSPPDRVKEYTKRFIQVQEAYETLSDPRRRAMYDRDMARGIHFAFSARRRYYDDEVIEQKSEWKARWQSQLSELKRRSKVKHNGENLSWAAQMRRRRAESCNDS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0075 274 MobiDBLite consensus disorder prediction 1 72 - -
Lele22g0075 274 ProSiteProfiles dnaJ domain profile. 140 207 IPR001623 -
Lele22g0075 274 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 131 270 - -
Lele22g0075 274 SMART dnaj_3 139 199 IPR001623 -
Lele22g0075 274 MobiDBLite consensus disorder prediction 33 55 - -
Lele22g0075 274 FunFam Chaperone protein dnaJ 20, chloroplastic 126 235 - -
Lele22g0075 274 Gene3D DnaJ domain 129 248 IPR036869 -
Lele22g0075 274 MobiDBLite consensus disorder prediction 56 72 - -
Lele22g0075 274 PRINTS DnaJ domain signature 179 199 IPR001623 -
Lele22g0075 274 PRINTS DnaJ domain signature 142 160 IPR001623 -
Lele22g0075 274 PRINTS DnaJ domain signature 160 175 IPR001623 -
Lele22g0075 274 PRINTS DnaJ domain signature 199 218 IPR001623 -
Lele22g0075 274 SUPERFAMILY Chaperone J-domain 137 212 IPR036869 -
Lele22g0075 274 Pfam DnaJ domain 141 204 IPR001623 -
Lele22g0075 274 CDD DnaJ 141 196 IPR001623 -
Lele22g0075 274 MobiDBLite consensus disorder prediction 250 274 - -
Lele22g0075 274 ProSitePatterns Nt-dnaJ domain signature. 184 203 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0075 Lele-ChrLele22 452904 456584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0075 136 204 C2H2 Transcription Factor Family AT1G74250 40.278 1.90e-07 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g0075 22 452904 456584 Lele22g0075 22 452904 456584 ECH
Lele22g0075 22 452904 456584 Lele23g1979 23 22665444 22666914 hybridization
Lele22g0075 22 452904 456584 Lele24g0071 24 468383 474718 hybridization