Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0065 ATGAGCAGCTCAGGACCCAAGGAAGGCCAAGAGGCTGCTAGAGATTTTCAAAATCAGCAAATCGTGGTTTTTGACTTGGACCTCAACCTTCCTCTTCTAGAGGAGAGCCCGGATGCAGCAGCTCAAGGATCAGCCCTTGATAATGAAAATTTGCACTTGCAGATAGGTGATGCTGAACTTGATGATGTTATCATAATCTCCCCAAGAAAATTTGAAGAAGCAAAGAACAATTCTCGAAGAAAAAATGCTTGTCAAAGCTATGCGGTTATACGAGTGTTTGATGAAGATAGGGGAAACATTTCAGAAGTGACAGCAGATGCAGTTTCTCACCCTATTAGTGACAACAGACATGAAAATCCACAAAACCAACCAATTGTGGACTGTGAGCTGCACCTAGGTGTGAAAGATAGTAAGGTAGCCAAGGTGCTGCCAGAGGAACCCACCTTCAGTTGCACGATTTGCATGGGCCAGCTGATTGAAGAGACATCAACAAAGTGCGGCCACATTTTCTGCAAGAAGTGCATTCAGGCAGCCATAGCTGCTCAACACAAATGTCCCACCTGCCGGCGATTTATAAATGGAAAGCTGATGACCAACATTTCTGATTTGATTCTCTTTTTACACAACGTATTCTGCAAAATGCTGAAATCTATTTATATCGACCCATTTTTTATGCACTTGCAAGATAATCAATATCCGACGTCAATTCCTATTAACAGCTGCCGTGCTGATCAGTAA 738 0.4282 MSSSGPKEGQEAARDFQNQQIVVFDLDLNLPLLEESPDAAAQGSALDNENLHLQIGDAELDDVIIISPRKFEEAKNNSRRKNACQSYAVIRVFDEDRGNISEVTADAVSHPISDNRHENPQNQPIVDCELHLGVKDSKVAKVLPEEPTFSCTICMGQLIEETSTKCGHIFCKKCIQAAIAAQHKCPTCRRFINGKLMTNISDLILFLHNVFCKMLKSIYIDPFFMHLQDNQYPTSIPINSCRADQ 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0065 245 SMART ring_2 151 188 IPR001841 -
Lele22g0065 245 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 221 IPR013083 -
Lele22g0065 245 SUPERFAMILY RING/U-box 150 193 - -
Lele22g0065 245 PANTHER ELFLESS, ISOFORM B 3 191 - -
Lele22g0065 245 Pfam Zinc finger, C3HC4 type (RING finger) 151 188 - -
Lele22g0065 245 ProSiteProfiles Zinc finger RING-type profile. 151 189 IPR001841 -
Lele22g0065 245 ProSitePatterns Zinc finger RING-type signature. 166 175 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0065 Lele-ChrLele22 399221 403171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0065 57 200 C3H Transcription Factor Family AT5G48655 40.909 8.33e-22 88.2