Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0049 ATGACCAAACCAAATCTTCGCGTCCCCCGCGGGCATTACGGAAATTCTGTTGGAAGTCCAGGCCGTTCTGGAGTTTGGGGCAAGGGTAGGAACAGGATGGGGGTCAAGGCTAAGAAAGCAATGAAGAAGAGTCTGAAAAAGGCCACAGTTAAGGTGTCTTTTGTGAGCAAGAAAACAGAGGGTGACTTCTTGCCTTTGGAAGGTGGTCCTGCACGCAAACTTCCTGAACATAAATCGCCAGAGAACTCATCCACTGTTTTATATGTTGGTCGGATACCACATGGGTTCTATGAGAAGGAGGTGGAAGGTTTCTTTGGACAATTTGGTACGATCAAGAGGTTGAGAATTGCAAGAAATAAAAAGACAGGAAAATCTAGACATTTTGGCTTCATACAATTTGAATCTCCTGAGGTGGCAAAAATTGTAGCTGAGACCATGCACAATTATCTGCTACAAGAACACGTTCTGCAGGTTCACCGGATACCTCCAGAGGATGTTCATCCAAAATTATGGAGGGGCTTCAATTGCCGGTTCAAGCCATTGGACTCTGTTCAAATTGAAAGAAAGCGGCTTGGCAAGGAAAGAACATTGGTAGAGCAACAAAAGTTGGTTGAAAAGATCATGAAGCGTGGCGAAAAACGACAAAAGAGGATAGAAGCTGCTGGGATTGATTATGAATGCCCTGAGATTTGTGAATATCGTTTATTTTCCATGCACTTGTGGGTCGTGAGAGCTGATTTTGCTTTTTTGATGACTAGTGACAACATGCTGTTATCAGATTTCAAGAATTGGCCCTGA 798 0.4373 MTKPNLRVPRGHYGNSVGSPGRSGVWGKGRNRMGVKAKKAMKKSLKKATVKVSFVSKKTEGDFLPLEGGPARKLPEHKSPENSSTVLYVGRIPHGFYEKEVEGFFGQFGTIKRLRIARNKKTGKSRHFGFIQFESPEVAKIVAETMHNYLLQEHVLQVHRIPPEDVHPKLWRGFNCRFKPLDSVQIERKRLGKERTLVEQQKLVEKIMKRGEKRQKRIEAAGIDYECPEICEYRLFSMHLWVVRADFAFLMTSDNMLLSDFKNWP 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0049 265 MobiDBLite consensus disorder prediction 1 29 - -
Lele22g0049 265 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 85 163 IPR000504 GO:0003723
Lele22g0049 265 CDD RRM_NIFK_like 86 159 - -
Lele22g0049 265 SMART rrm1_1 86 159 IPR000504 GO:0003723
Lele22g0049 265 SUPERFAMILY RNA-binding domain, RBD 67 172 IPR035979 GO:0003676
Lele22g0049 265 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 87 156 IPR000504 GO:0003723
Lele22g0049 265 Gene3D - 30 167 IPR012677 -
Lele22g0049 265 PANTHER MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEIN 36 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0049 Lele-ChrLele22 306877 310296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0049 83 211 Eukaryotic Initiation Factors Gene Family AT1G71770 32.090 1.74e-09 56.2