Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0042 ATGAGGGAGGTAGTAGGCACTGGAGAGTTTGATGAAGAAATGTACGTTTCTTCTTCACCTAAAGAAGAAGCAGAAGCAGAGAAGAACATTTACAGATACATATTCGGCTACGTTGAGATGGCCGTCGTAAAATGCGCCATCGAGCTCAACGTAGCAGAAGCCATTGAAAGCCACCACACTCCCATCACGCTTTCCCAACTCTCATCAACCATAAACTGCGACCCCTCCATGCTGTACCGCATCATGCGCTTCCTCACTCGCCGGAACATCTTCAGACAAGTCTCTACCACCCACGAAGGCGGCCGGCCTGAGCCCGCGTACGTGCACACCGCTCTTTCCCGGCTTCTGATAAAGAACAGCGAGGCCAGCATGGCGGCTTTTGTGATGCTGGAGTGCAGCCCCGTCATGCTGGCGCCGTGGCAGAACCTAAGCGGGAGGGTTCGGGCGAACGGGACGTCGTCGTTCGAGAAGGCTCACGGGAAGGATGTGTGGGGGTACGCGGAGGCGAACGCGGAGCACGGGGAGCTGATAAACGAGGCGATGGCGTGCGATGCCCGGAGAGGGGTGAGGGAGATAGTGGAGCACTGCCCGGAGGCGTTCGAGGGGGTGAGGTCGGTTGTGGACGTGGGCGGAGGGAACGGAACCGCCATGAGGGTGCTGGTGAGGGCCTGCCCCTGGCTGCGATGCATAAACTTCGATCTTCCGCATGTAGTGTCGGGGGCTGCCCAGTGCGAGGGCGTGGAACACGTGGGAGGAGACATGTTCGTGAGTGTTCCGAAAGCAGACGCTGCATTTCTTATGTGGGTGCTGCATGACTGGGGAGACGAGGAATGCATAGAGATACTGAAGAAGTGCAAGGAGGCGGTAGGAGAGAAGGGAAGGGTGCTGATAGCGGAGGCGGTGATAGGGGAAGAAGGAGGAGAGAAGAAGAAGGAGGAGAGAAGAAGAAGAAGGAGAAGGAAGAGAGGTTGGAGGAGGTGGGGCTGA 987 0.5745 MREVVGTGEFDEEMYVSSSPKEEAEAEKNIYRYIFGYVEMAVVKCAIELNVAEAIESHHTPITLSQLSSTINCDPSMLYRIMRFLTRRNIFRQVSTTHEGGRPEPAYVHTALSRLLIKNSEASMAAFVMLECSPVMLAPWQNLSGRVRANGTSSFEKAHGKDVWGYAEANAEHGELINEAMACDARRGVREIVEHCPEAFEGVRSVVDVGGGNGTAMRVLVRACPWLRCINFDLPHVVSGAAQCEGVEHVGGDMFVSVPKADAAFLMWVLHDWGDEECIEILKKCKEAVGEKGRVLIAEAVIGEEGGEKKKEERRRRRRRKRGWRRWG 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0042 328 Pfam Dimerisation domain 42 86 IPR012967 GO:0046983
Lele22g0042 328 PANTHER O-METHYLTRANSFERASE 41 308 IPR016461 GO:0008168
Lele22g0042 328 PIRSF O-mtase 9 322 IPR016461 GO:0008168
Lele22g0042 328 SUPERFAMILY "Winged helix" DNA-binding domain 22 119 IPR036390 -
Lele22g0042 328 MobiDBLite consensus disorder prediction 313 328 - -
Lele22g0042 328 Pfam O-methyltransferase domain 140 312 IPR001077 GO:0008171
Lele22g0042 328 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 328 IPR016461 GO:0008168
Lele22g0042 328 Gene3D Vaccinia Virus protein VP39 117 327 IPR029063 -
Lele22g0042 328 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 312 IPR029063 -
Lele22g0042 328 CDD AdoMet_MTases 206 297 - -
Lele22g0042 328 Gene3D - 16 116 IPR036388 -
Lele22g0042 328 MobiDBLite consensus disorder prediction 306 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0042 Lele-ChrLele22 266442 267507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0042 43 304 Monolignol Biosynthesis Gene Families AT5G54160 35.206 3.23e-54 179