Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0025 ATGAGAAAGCCCTCATCGGCGTCGTCCCGGTCAGCTGAAGCCGCGCCTGCTAAGACCACTCCCTGCTGCAGCAAAGTAGGGCTCAAGAGAGGCCCTTGGACTCCTGAGGAAGACGAGCTCCTCTCCAAGTACATCCAAACTGAGGGAGAAGGCAGGTGGCGCACCCTACCTAAGAGAGCCGGTCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGTTGGATGAACTATCTCCGCCCATCCGTCAAGCGCGGCCATATCGCCCCCGACGAGGAGGATCTCATCCTCCGCCTCCATCGCCTCCTCGGCAACCGGTGGTCTCTGATAGCGGGCAGGATCCCTGGGAGAACCGACAACGAGATCAAGAACTACTGGAATACCCATCTCAGCAAGAAGCTCATCAGCCAAGGCATTGATCCCCGCACCCACAAGCCCCTCAACCCTAGTACTCAGCCATCAAACAGTGCTGCTCCATGTCCGCATCACCATCCACATGATCGTAATCATTCATCCTCCAACCCCGCTGCTACCACTAAACCTAATCCTAATAATAAACCTCCAATTACTGAGCAGGACCCCAATCCCTACTGTCATGCCACTCCTCCCCATCACTTGGATCCATATGATCAAGCATTGGCCCTCGGGGATCTGCCCGCAATCCCCTTGGCCAACACCCCCAGCAATGACGACGACGAAGATATCAACCACTGTACCGACGATGTCTTCTCCTCTTTCATCAACTCACTGATCAACGACGATGCCTTTTCTGCTCAGCAGCAGCACCCTCCACCGCCTCCTTTTAACGGCATTGATGGTGTGGCCTGGGAATCTTCGCTGGTCTCCGCCCACGAAGACCCCAAGAATAATATGCCTGATGCAGATGGTGTCCGCTAG 891 0.5612 MRKPSSASSRSAEAAPAKTTPCCSKVGLKRGPWTPEEDELLSKYIQTEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPSVKRGHIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLISQGIDPRTHKPLNPSTQPSNSAAPCPHHHPHDRNHSSSNPAATTKPNPNNKPPITEQDPNPYCHATPPHHLDPYDQALALGDLPAIPLANTPSNDDDEDINHCTDDVFSSFINSLINDDAFSAQQQHPPPPPFNGIDGVAWESSLVSAHEDPKNNMPDADGVR 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0025 296 Pfam Myb-like DNA-binding domain 88 128 IPR001005 -
Lele22g0025 296 Pfam Myb-like DNA-binding domain 30 77 IPR001005 -
Lele22g0025 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 77 IPR017930 -
Lele22g0025 296 MobiDBLite consensus disorder prediction 1 15 - -
Lele22g0025 296 ProSiteProfiles Myb-like domain profile. 25 77 IPR001005 -
Lele22g0025 296 MobiDBLite consensus disorder prediction 137 208 - -
Lele22g0025 296 SMART sant 29 79 IPR001005 -
Lele22g0025 296 SMART sant 82 130 IPR001005 -
Lele22g0025 296 Gene3D - 87 156 - -
Lele22g0025 296 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 20 184 - -
Lele22g0025 296 SUPERFAMILY Homeodomain-like 27 124 IPR009057 -
Lele22g0025 296 MobiDBLite consensus disorder prediction 255 296 - -
Lele22g0025 296 MobiDBLite consensus disorder prediction 169 184 - -
Lele22g0025 296 MobiDBLite consensus disorder prediction 141 156 - -
Lele22g0025 296 FunFam transcription repressor MYB5-like 87 155 - -
Lele22g0025 296 MobiDBLite consensus disorder prediction 1 21 - -
Lele22g0025 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 132 IPR017930 -
Lele22g0025 296 CDD SANT 32 77 IPR001005 -
Lele22g0025 296 ProSiteProfiles Myb-like domain profile. 78 128 IPR001005 -
Lele22g0025 296 FunFam Myb transcription factor 27 83 - -
Lele22g0025 296 CDD SANT 88 128 IPR001005 -
Lele22g0025 296 Gene3D - 27 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0025 Lele-ChrLele22 181962 182992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0025 15 251 MYB Transcription Factor Family AT3G13540 56.723 3.81e-85 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele22g0025 Myb_DNA-binding 4e-14 CL0123