Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0020 ATGGGAAAGTGCAGAAATAGGGAAGATCAGAGAGAGAACGGTGGCGCCGGCCACTACCCAAGAGGGGGCGGCAATGGCCTGAAACTGGAGTTGAAGATGATCAAAAACGATTTTTGGAACTTGGAAGAATTCAGGGCGAGAAGGAAATGCTGGGATGAAAGCTTGGTTTTGTGGAAAATGGCAACTTTAATTGAGCCGCCGAATAAAATTGGGCCGAAGGGGAAGCATTATTACTCCATATGGCAAACAGTGTTCGAGATTGATACAAAGTACGTTCCAATAAAACCCATCGGACGAGGAGCATATGGTGTAGTATGCTCTTCTATCAACAGGGAAACCAACGAGAAATTTGCAATTAAGAAGATTGGTAATATATTTGAGAATCGCATTGATGCGTTGAGAACGCTGAGGGAATTGAAGCTGCTTAGACATATTAGGCACGAGAATGTGATTGCTTTGAAGGATGTGATGTTGCCTGCCCAGAGAACAAGTTTCAAGGATGTGTACTTGGTTTATGAACTCATGGATACTGATCTTCATCAAATAATTAAATCTTCGCAGCCCCTCTCCAATGATCATTGCAAATATTTTATATTTCAGTTGCTTCGAGGTCTCAAATATCTTCACTCCGCAAATATCCTTCACCGGGACTTGAAGCCTGGAAATCTGCTCATCAACGCCAACTGTGATCTTAAGATATGTGACTTTGGGCTTGCACGAACAAATGGAGGAGACGGGCAGTTCATGACGGAGTATGTTGTGACCCGCTGGTATCGTGCTCCAGAGCTGCTCTTATGCTGTGAAAATTATGGAACCTCAATTGATGTGTGGTCCGTAGGATGCATTTTTGCGGAGGTTCTTGGTAGAAAGCCAATCTTTCCTGGAACTGAATGCCTGAACCAGTTGAAACTTATCATACGTGTGCTGGGAAGCCAGGATGAGTCGGATCTCGCGTTTATTGATAATCCAAAGGCCAGGAGGTATATCAAATCACTGCCTTACACAAGAGGCGTGCACTTGTCTCAGCTGTACCCACAAGCGGATCCACTAGCCATAGATTTATTGCAGAAAATGCTGGTGTTTGATCCCACCAAGAGAATTACTATCATGGAAGCACTGCAACACCCATATATGGCCGGCCTTTATGATCCAAGATCTAATCCTCCCGCCCAGGTTCCCATCAATCTCGACCTAGATGAAAACTGGAGGGAACCCACCATTAGGGAAATGATGTGGAACGAGATGCTTCACTATCATCCCCAAGCTTCTGCCCATTCATAG 1281 0.4473 MGKCRNREDQRENGGAGHYPRGGGNGLKLELKMIKNDFWNLEEFRARRKCWDESLVLWKMATLIEPPNKIGPKGKHYYSIWQTVFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKFAIKKIGNIFENRIDALRTLRELKLLRHIRHENVIALKDVMLPAQRTSFKDVYLVYELMDTDLHQIIKSSQPLSNDHCKYFIFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNGGDGQFMTEYVVTRWYRAPELLLCCENYGTSIDVWSVGCIFAEVLGRKPIFPGTECLNQLKLIIRVLGSQDESDLAFIDNPKARRYIKSLPYTRGVHLSQLYPQADPLAIDLLQKMLVFDPTKRITIMEALQHPYMAGLYDPRSNPPAQVPINLDLDENWREPTIREMMWNEMLHYHPQASAHS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0020 426 Gene3D Transferase(Phosphotransferase) domain 1 175 404 - -
Lele22g0020 426 SMART serkin_6 91 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0020 426 Gene3D Phosphorylase Kinase; domain 1 78 412 - -
Lele22g0020 426 FunFam Mitogen-activated protein kinase 77 185 - -
Lele22g0020 426 MobiDBLite consensus disorder prediction 1 15 - -
Lele22g0020 426 SUPERFAMILY Protein kinase-like (PK-like) 83 384 IPR011009 -
Lele22g0020 426 MobiDBLite consensus disorder prediction 1 21 - -
Lele22g0020 426 CDD STKc_TEY_MAPK 85 420 - -
Lele22g0020 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Lele22g0020 426 ProSiteProfiles Protein kinase domain profile. 91 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0020 426 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 90 393 - -
Lele22g0020 426 FunFam Mitogen-activated protein kinase 175 404 - -
Lele22g0020 426 Pfam Protein kinase domain 92 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele22g0020 426 ProSitePatterns Protein kinases ATP-binding region signature. 97 121 IPR017441 GO:0005524
Lele22g0020 426 ProSitePatterns MAP kinase signature. 126 229 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g0020 Lele-ChrLele22 157629 161995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g0020 60 422 MAP Kinase Gene Family AT2G18170 85.675 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lele22g0020 Pkinase 3.1e-70 CL0016