Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g0002 ATGTTTGATTTTTTTTTTGTTCAGATGAAAGAAGTTTGTCTAAATAGTGGGCCAATTTTTGATGAATGTGATGAGTTTGACGTTGAGAACCCTTCTGTATCAGAGCATGGTCAGGAATCTTTGGACTCAAGATCAAAGAACCATCTGCCTCCAAATGTGGGCCTGGAGTTTGATTCTTTTGAAGAAGCTTACAACTTTTACAATGTTTATGCTAAAGAACAAGGTTTTGGCATTAGAGTGAGCAACTCATGGTTTAGATCAAGGAGAAAAGAGCGGTATAGAGCAAAACTCAGCTGCAGTAGTGCTGGTTTCAAGAAAAAGAGTGAAGCTCATAATCCAAGACCAGAAACAAGAACTGGTTGCCCTGCAATGATAGTCATTAGGATGGTGGATTCCAAAATATGGAGGATAGTGGAAGTTGAACTGCAACACAACCATCAAGTGAATCCAGGAATTAAACGGTTCTACAAGTCACATAAGAAAATGATACTTGCAGCCAGAGAAGCACAACCGCCACCAGATCCTATTACAGAAATACATACCATTAAATTGTATCGAACAGCTGTTATGGATGCTGTTGATCAGGTAAATGTTAATGGATCCATAGTAACATATATGGTGAAGGAACGAGTTGAAAATGGGGGAAATGAGAAGGAGGTTAAAAAATTTGAAGTCTTGTACGAGGCAAATGGACTTGACATACGGTGCATCTGCGGTTTGTTCAATTACAAAGGCTATCTATGTAGGCATGCACTGAATGTTCTCAATTATAATGGCTTGGAGGAAGTCCCATCTCGGTACATTCTGCAACGTTGGAAGAAAGATTTCAAACAAAGGTTTATTCAAGACCATGTCTCTGGTAACGCTGATGCATACAACCCTGTTGTATGGCATAAACAACTTTTTCATAATGCTCTTCCAGTGCTAGAAGGGGCACAGTCGCAAGAGCATTACATGATTGCTTTACTAGAACTGGAACAGTTGTTAAACAAGTTTGATCTATTGGAGAATAACTCATTGTGA 1023 0.391 MFDFFFVQMKEVCLNSGPIFDECDEFDVENPSVSEHGQESLDSRSKNHLPPNVGLEFDSFEEAYNFYNVYAKEQGFGIRVSNSWFRSRRKERYRAKLSCSSAGFKKKSEAHNPRPETRTGCPAMIVIRMVDSKIWRIVEVELQHNHQVNPGIKRFYKSHKKMILAAREAQPPPDPITEIHTIKLYRTAVMDAVDQVNVNGSIVTYMVKERVENGGNEKEVKKFEVLYEANGLDIRCICGLFNYKGYLCRHALNVLNYNGLEEVPSRYILQRWKKDFKQRFIQDHVSGNADAYNPVVWHKQLFHNALPVLEGAQSQEHYMIALLELEQLLNKFDLLENNSL 340
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele22g0002 340 Pfam SWIM zinc finger 231 256 IPR007527 GO:0008270
Lele22g0002 340 ProSiteProfiles Zinc finger SWIM-type profile. 223 259 IPR007527 GO:0008270
Lele22g0002 340 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 205 332 IPR031052 GO:0006355
Lele22g0002 340 Coils Coil 318 338 - -
Lele22g0002 340 Pfam FAR1 DNA-binding domain 65 150 IPR004330 -
Lele22g0002 340 SMART 26again6 234 261 IPR006564 GO:0008270
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele22g0002 Lele-ChrLele22 18315 20339 Dispersed/Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele22g0002 FAR1 1.4e-23 CL0274