Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g2012 ATGATACCGCCGCCTCGTCTTCTTTCCGAGAGAACTGCCTCCTTGCCAGTCCCTGAGTCAGGGTTTCGCTCTTCTTCAAGTCGGGTCGAATTTGGCGATGGAGAATTCTCTGAGGACTCCTCTACCGTAGGTTGGTTTCGTCGCAGTAGTTCAGGAAAGTTTGCTTCGAATTTCCCGGGAGGAGGTTTTGATATGTCCTCCTTGAAGCACCCGGAAGATTTAGCGGGCGATAGCTTTACTATGGCAGGGAAACCGGAAAAACCCGCCGGCGGCCCTGAAAAGGAGGAAGAGGTTGCCAAAGAAGTATGGCATGATCCGCCATCATGTTTAGAGCCGAGGAAAACTAAAACTACAAAGGCTGAGAGACTGGCCTTACAGGAGGCACAGCGAGCTGCCAAAACTGCTTCAAAAGCTGAGGGAGGTAAAGTTGTTGCTAAATCCAACAGAGCAGCCCCAGCCAAATTTTCAAAGGAACCTTTACAAAAGAAAGATGGTTCTCCAGCTGCATCTCCCGTGTCAACTGACAAGAAGGTTAGGTCATGTTATTTGGCAGGAGATATATTAGGGGGTAATGCTCGTTGTATTGCAATGCTAAGAGCATTTCAGGGAGCCATTAAAGACTACAAAACACCATGCGACAAGACCCTTGATAGGGATTTAATGGCAAAAATCAGCAGTTATGTTTCCTTTTTTACTAAATGTAGACCTCTTTCCATTAGCATGGGAAATGCGATTAAGAGGCAAAAACAACTCTCTTTTTCTGATATTGATCGGTTCATCATCGAGAAAATTGTTCTTGCTGATAAGGTGATTCTTGGGCGTGCTGCTGCAAAGATTCGAGATGGAGATGTTGCTCTTACATATGGAGCGTCATGTGTAGTTGAGATGACACTTTTACATGCCTATGAGCTAGGGAAACAATTCCGTGTTGCGTTGGTAGATTCACGACCAAAGATTGAAGGCCAGTCATTACTTCTTCCGCGAGTTTTTCTGGGCGCCTCTGGAGTTCTTCCTAATGGAACTGTATATTCAAGGGTTGGAACTGCACGTGTTGCAATGGTGGTTCATGCATTTCGTGTTCCTGTTTTGATCTGTTGTGTAGCATACAAGTTTCATGAAAGAGTGCTACTTGACTCAATATGTTCCAATGAACTAGGTAGTTCAGAAGGAGGTAACAAGGAAGCTGTTGCCAGGGTTCCTGGGAGAATGGATTTAAGTTATTTGGACAATTGGACAAGTAAAGACAATATGCAGATTCTGAATTAA 1266 0.4471 MIPPPRLLSERTASLPVPESGFRSSSSRVEFGDGEFSEDSSTVGWFRRSSSGKFASNFPGGGFDMSSLKHPEDLAGDSFTMAGKPEKPAGGPEKEEEVAKEVWHDPPSCLEPRKTKTTKAERLALQEAQRAAKTASKAEGGKVVAKSNRAAPAKFSKEPLQKKDGSPAASPVSTDKKVRSCYLAGDILGGNARCIAMLRAFQGAIKDYKTPCDKTLDRDLMAKISSYVSFFTKCRPLSISMGNAIKRQKQLSFSDIDRFIIEKIVLADKVILGRAAAKIRDGDVALTYGASCVVEMTLLHAYELGKQFRVALVDSRPKIEGQSLLLPRVFLGASGVLPNGTVYSRVGTARVAMVVHAFRVPVLICCVAYKFHERVLLDSICSNELGSSEGGNKEAVARVPGRMDLSYLDNWTSKDNMQILN 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g2012 421 MobiDBLite consensus disorder prediction 65 115 - -
Lele21g2012 421 Gene3D - 328 421 IPR042529 -
Lele21g2012 421 MobiDBLite consensus disorder prediction 131 173 - -
Lele21g2012 421 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 93 173 - -
Lele21g2012 421 SUPERFAMILY NagB/RpiA/CoA transferase-like 187 388 IPR037171 -
Lele21g2012 421 MobiDBLite consensus disorder prediction 88 115 - -
Lele21g2012 421 MobiDBLite consensus disorder prediction 1 42 - -
Lele21g2012 421 Pfam Initiation factor 2 subunit family 329 389 IPR000649 GO:0044237
Lele21g2012 421 Pfam Initiation factor 2 subunit family 189 323 IPR000649 GO:0044237
Lele21g2012 421 Gene3D - 264 327 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g2012 Lele-ChrLele21 26961344 26964718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g2012 177 421 Eukaryotic Initiation Factors Gene Family AT5G38640 57.193 3.00e-99 308