Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g2001 ATGGCGGGTCGTAGAAGAAAGAGGCACCACTTCAGCAGAATCCATGCGTTTACGTGTGGCAAAGCGTCGTTTAGAGGGGAGCATTCGCTCATTGGAGGCCCTGGATTCTCCAGGATGGTGCTATGCAACGAGCCAGAACACGAGGAGGATTATGGCGATAATTACGTGAGAACTACTAAATATACCCTTGCCTCGTTCCTCCCGAAGTCGTTATTCGAGCAATTTAGGAGGGTTGCTAACTTCTATTTCCTCGTATGTGCGATCTTGTCATTCTTCCCCGTTTCTCCTTATTCAGCTGTCAGCAATGTTGTTCCTCTGGTGGTTGTGGTTGCTGTAAGTATGGGCAAAGAGATGGTTGAAGACTGGAAACGCAAACAACAGGATATTGAGATGAATAACAGAAAGGTTAAAGTACATCGTGGAGGAGGCGCTTTTGATCATTCCAAATGGAGGGATATAAAAGTTGGAGACATAGTAAAGGTGGAAAAAGATGAATTTTTTCCTGCTGACCTCGTCTTACTTTCATCGAGTTATGATGATTCTGCTTGCTATGTTGAGACCATGAATCTTGACGGAGAAACAAATCTTAAGTTGAAACAAGCGCTAGAAGAAACTTCCAAATTGCAAGAAGATACAAGCTTTCAGAACTTCAAAGCTATGATCGAATGTGAAGATCCAAACGCAAATTTGTACTCCTTCGTGGGCACTCTGCAGCTTGAAGATCAACAGTACCCTCTTGCACCTCAGCAGCTTCTTCTTAGGGACTCAAAGCTGAGGAATACGGATTTTATCTATGGTGTGGTAGTCTTTACAGGTCATGATACAAAGGTTATGCAGAATTCAACAGACCCTCCTTCAAAGAGAAGCAAAGTTGAGAAACGAATGGATAAGATAATCTACTTCCTATTCTTTGTCTTATTCATTATTGCTCTTATTGGATCCATTTTCTTTGGAATTTCAACTAGGCAAGACCTTGAAAATGGAAGAATAAAAAGATGGTACCTTAGACCAGACAATACTACAGTCTACTATGATCCAAATCAAGCAGCAGTTGCAGCAATTTTACATTTCTTGACCGCACTTATGTTATATGGTAACTTGATTCCCATTTCCTTGTATGTTTCGATAGAAATCGTGAAAGTTCTTCAGAGCATATTCATTAACCAAGATGCGAACATGTATTATGAAGAAACTGACAGGCCGGCTCATGCTCGAACGTCGAATTTGAATGAAGAACTTGGCCAAGTTTGTACCATACTTTCAGATAAAACAGGAACTTTAACATGTAATTCTATGGAATTTATCAAGTGTTCCATTGCTGGGGTTTCTTATGGTCGTGGAGTTACAGAAGTTGAGAGAGCTCTAGCTAGAAGAAAAGGATCACCTTTATTTCAAAATTCGACCGATGAGGATGGTCATGTTGCGGGAAAGCCATCCATCAAAGGATTTAACTTTGTAGATGAAAGGATTATGAACGGAAATTGGTTCAATGAGACTCGTGCAAATGAAATCCGGGACTTTCTGCGTTTGCTGGGCGTATGCCATACTGCCGTGCCTGAAGTTGACGAAGAAACAGGTAACATCTCATATGAAGCAGAATCACCAGATGAGGCAGCTTTTGTGATTGCTGCAAGAGAACTAGGTTTCGAATTTTATGAAAGGACACAGACAGCAATTTTGATACGTGAGTTCAACCCCAAATCAAAGATGAAGGAGGAAAGATCCTACAAACTCTTAAACATAATAGAATTTAGCAGTGCAAGAAAGCGGATGTCTGTTATTGTTAGAGATGAGGAGGGGAAACTATTACTACTCTCCAAAGGTGCTGATAGTGTCATGTTTGAAAGACTTGGAAAGAATGGAAGGATGTTTGAGGAGAAGACTAAGAAGCATATTGATGAGTATGCTGATGCTGGTCTGAGGACATTGTTACTTGGATATCGCACGCTTGATGAGGAAGAATATAATCAATTTAACAAAGAATTCACAGAGGCCAAGAACTTGGTTAGTGCAGATCGGGAGCAGATTATAGAGGAAGTAGCAGAGAAGATTGAGAAGGATTTCATTCTTCTTGGTGCTACTGCAGTTGAAGACAAACTTCAAAATGGGGTTCCTGAATGCATTGATAAATTAGCACAAGCTGGTATTAAGCTATGGGTTTTGACCGGTGATAAGATGGAGACAGCAATCAATATTGGATTTGCTTGCAGTTTACTAAGACAAGGAATGAAGCAAATTATAATTAGCTCAGACACTCCAGAAATCAAATCACTGGAGAAAATTGAGGACAAGTCTGCTTCTGCAATGGCAATTAAGGCAAGTGTTGTTCGTCAGATAAGGGATGGGAAGGCATTCCTCTCTAAGTCAGATGACAACTCTGAGGCATTATCTCTAATCATCGATGGCAAGTCTCTTGCGTACGCACTCCAGCATGATGTGAAGGACTTGTTTCTCGAACTTGCAGTTGGCTGTGCATCTGTTATATGCTGCCGTTCATCTCCCAAACAGAAAGCACTTGTAACAAGACTGGTAAAGACTAAAACTGGTAGTACAACTCTTGCAATTGGTGATGGGGCAAACGATGTTGGAATGCTCCAGGAGGCAGACATTGGAATTGGAATCAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCAAGTGACATCGCTATTGCCCAATTTCGGTTTCTCGAGCGCCTACTTCTCGTGCATGGACATTGGTGTTACAGAAGGATATCGAAAATGATTTGCTACTTCTTTTACAAGAATATTGCCCTCGGTTTCACTCTCTTATTCTTTGAGGTGTATGCATCATTCTCAGGGCAAGCAGCTTATAATGATTGGTTCTTGTCACTATACAACATATTCTTCACTTCACTTCCCGCGATTGCCTTGGGAGTGTTTGACCAAGATGTCTCTGCTAGATTATGTCTCAAGTTTCCACTACTATATCAAGAAGGTGTACAAAATGCCCTATTTAGCTGGAAACGAATTCTTGGTTGGATTTTTAATGGGCTGTTGAGTTCTGTCATCATCTTCTTCTTCTGTGTGAAAGCGATGGAGCTTCAAGCCTTCCGAAAGGGCGGTGAAATTGTGGGTCTGGAGATCCTGGGAGGCACCATGTACACATGTGTGGTTTGGGTGGTGAACAGTCAAATGTCATTATCTATAAGCTACTTCACATACATACAGCATATATTCATATGGGGGGGCATTCTGTTTTGGTACATATTCCTGTTGGCATATGGGGCCATGGATCCCAGCATTTCAACCACCGCTTACATGGTCTTCATTGAAGCTCTGGCTCCCTCCCCGTCTTACTGGTTCATCACTTTGCTTGTGCTCTTTTCCTGCCTTGTTCCATACTTGGCCTATTCTTCCATCCAGATGAGGTTTTTCCCAATGTACCATCAAATGATACAGTGGATAAGAAATGACGGCCTAAGCAGGGATCCAGAATACTGTGATATGGTGAGACAGAGATCCATACGACACACCACCGTTGGGTACACTGCCCGTTTTGAAGCATCCAAACGATTTGAAGACAAGCCCTCAGCAGCAGCAGCAGAATTATATGTGTAA 3579 0.4186 MAGRRRKRHHFSRIHAFTCGKASFRGEHSLIGGPGFSRMVLCNEPEHEEDYGDNYVRTTKYTLASFLPKSLFEQFRRVANFYFLVCAILSFFPVSPYSAVSNVVPLVVVVAVSMGKEMVEDWKRKQQDIEMNNRKVKVHRGGGAFDHSKWRDIKVGDIVKVEKDEFFPADLVLLSSSYDDSACYVETMNLDGETNLKLKQALEETSKLQEDTSFQNFKAMIECEDPNANLYSFVGTLQLEDQQYPLAPQQLLLRDSKLRNTDFIYGVVVFTGHDTKVMQNSTDPPSKRSKVEKRMDKIIYFLFFVLFIIALIGSIFFGISTRQDLENGRIKRWYLRPDNTTVYYDPNQAAVAAILHFLTALMLYGNLIPISLYVSIEIVKVLQSIFINQDANMYYEETDRPAHARTSNLNEELGQVCTILSDKTGTLTCNSMEFIKCSIAGVSYGRGVTEVERALARRKGSPLFQNSTDEDGHVAGKPSIKGFNFVDERIMNGNWFNETRANEIRDFLRLLGVCHTAVPEVDEETGNISYEAESPDEAAFVIAARELGFEFYERTQTAILIREFNPKSKMKEERSYKLLNIIEFSSARKRMSVIVRDEEGKLLLLSKGADSVMFERLGKNGRMFEEKTKKHIDEYADAGLRTLLLGYRTLDEEEYNQFNKEFTEAKNLVSADREQIIEEVAEKIEKDFILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTPEIKSLEKIEDKSASAMAIKASVVRQIRDGKAFLSKSDDNSEALSLIIDGKSLAYALQHDVKDLFLELAVGCASVICCRSSPKQKALVTRLVKTKTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISKMICYFFYKNIALGFTLLFFEVYASFSGQAAYNDWFLSLYNIFFTSLPAIALGVFDQDVSARLCLKFPLLYQEGVQNALFSWKRILGWIFNGLLSSVIIFFFCVKAMELQAFRKGGEIVGLEILGGTMYTCVVWVVNSQMSLSISYFTYIQHIFIWGGILFWYIFLLAYGAMDPSISTTAYMVFIEALAPSPSYWFITLLVLFSCLVPYLAYSSIQMRFFPMYHQMIQWIRNDGLSRDPEYCDMVRQRSIRHTTVGYTARFEASKRFEDKPSAAAAELYV 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g2001 1192 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 103 204 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele21g2001 1192 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 822 938 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele21g2001 1192 Pfam Phospholipid-translocating ATPase N-terminal 42 101 IPR032631 -
Lele21g2001 1192 CDD P-type_ATPase_APLT_Dnf-like 53 1015 - -
Lele21g2001 1192 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 51 1140 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele21g2001 1192 PRINTS P-type cation-transporting ATPase superfamily signature 741 751 - -
Lele21g2001 1192 PRINTS P-type cation-transporting ATPase superfamily signature 420 434 - -
Lele21g2001 1192 PRINTS P-type cation-transporting ATPase superfamily signature 855 874 - -
Lele21g2001 1192 SFLD Haloacid Dehalogenase 402 906 - -
Lele21g2001 1192 Pfam Cation transport ATPase (P-type) 527 618 - -
Lele21g2001 1192 ProSitePatterns E1-E2 ATPases phosphorylation site. 422 428 IPR018303 -
Lele21g2001 1192 FunFam Phospholipid-transporting ATPase 691 895 - -
Lele21g2001 1192 Pfam E1-E2 ATPase 131 325 - -
Lele21g2001 1192 Gene3D - 687 895 IPR023214 -
Lele21g2001 1192 FunFam Phospholipid-transporting ATPase 112 282 - -
Lele21g2001 1192 SUPERFAMILY HAD-like 418 910 IPR036412 -
Lele21g2001 1192 SFLD p-type atpase 402 906 IPR044492 -
Lele21g2001 1192 Gene3D - 109 282 - -
Lele21g2001 1192 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1144 - -
Lele21g2001 1192 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 490 659 IPR023299 GO:0000166
Lele21g2001 1192 FunFam Phospholipid-transporting ATPase 533 691 - -
Lele21g2001 1192 Pfam Phospholipid-translocating P-type ATPase C-terminal 883 1133 IPR032630 -
Lele21g2001 1192 SUPERFAMILY Calcium ATPase, transduction domain A 133 280 IPR008250 -
Lele21g2001 1192 Gene3D - 521 666 IPR023299 GO:0000166
Lele21g2001 1192 SUPERFAMILY Calcium ATPase, transmembrane domain M 48 1133 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g2001 Lele-ChrLele21 26899603 26904931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g2001 10 1178 Primary Pumps ATPases AT1G68710 69.071 0.0 1752