Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1999 ATGGAAAACCTAGAGATCTCATCAGAATGTCCACTTTCTTCTCAAGACTCAAACAAAAGGCAATCTTTACTGCCTCGTGAATCAGGTAATAAGCCGTGTGTGAGCACAGATAGGAGGGTAAATGACAGAAAGTACCTCGGGGTGAGACAAAGGCCTTCAGGAAGGTGGATCGCTGAGATCAAGGACTCCTCACAGAAGTTGAGGCTTTGGCTGGGAACGTTTGACAGAGCAGAAGATGCTGCTATGGCTTATGATTGTGCTGCCAGGCTTCTAAGAGGAAGAAATGCCAAGACAAACTTCCAGTGGCCGATCTCCAAAACACACGAGGAAATTTGCAGCTTTTTGCGTAAGAATCCGAGGGCTTACCAGATTCTGAAGCATGCGGTCATGAAAAACCATCATGCAGTTCTTTCTTCCACGGCCATGCCTTGGAAGAACCAGATCAGTAATATGACAAGAGACGGACTCGACACACTTGTGGAAGAAACCATAGTTTGCTGTTCCACTAGTTCTGAAGAAGGTTCTTCATCTTCTTCTGGATGCTGTGGGGTGTCATTTGGGAGTTCTAAGGTTTATTCTTCTGTTGTTGTGGCTCCTTCTTTCAGCGCCTTATTTTGTGAGACAGATGATGGTCAGGAAGAAGCCCCTTAA 651 0.4578 MENLEISSECPLSSQDSNKRQSLLPRESGNKPCVSTDRRVNDRKYLGVRQRPSGRWIAEIKDSSQKLRLWLGTFDRAEDAAMAYDCAARLLRGRNAKTNFQWPISKTHEEICSFLRKNPRAYQILKHAVMKNHHAVLSSTAMPWKNQISNMTRDGLDTLVEETIVCCSTSSEEGSSSSSGCCGVSFGSSKVYSSVVVAPSFSALFCETDDGQEEAP 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1999 216 MobiDBLite consensus disorder prediction 1 29 - -
Lele21g1999 216 SMART rav1_2 44 109 IPR001471 GO:0003700|GO:0006355
Lele21g1999 216 FunFam ethylene-responsive transcription factor RAP2-11 43 102 - -
Lele21g1999 216 SUPERFAMILY DNA-binding domain 44 102 IPR016177 GO:0003677
Lele21g1999 216 CDD AP2 44 102 IPR001471 GO:0003700|GO:0006355
Lele21g1999 216 Gene3D AP2/ERF domain 43 102 IPR036955 GO:0003700|GO:0006355
Lele21g1999 216 ProSiteProfiles AP2/ERF domain profile. 44 101 IPR001471 GO:0003700|GO:0006355
Lele21g1999 216 PRINTS Ethylene responsive element binding protein signature 67 83 IPR001471 GO:0003700|GO:0006355
Lele21g1999 216 PRINTS Ethylene responsive element binding protein signature 45 56 IPR001471 GO:0003700|GO:0006355
Lele21g1999 216 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 14 139 - -
Lele21g1999 216 MobiDBLite consensus disorder prediction 1 36 - -
Lele21g1999 216 Pfam AP2 domain 44 93 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1999 Lele-ChrLele21 26887509 26888159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1999 41 100 AP2-EREBP Transcription Factor Family AT5G19790 68.333 1.53e-24 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele21g1999 AP2 2.3e-10 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1999 21 26887509 26888159 Lele21g1999 21 26887509 26888159 ECH
Lele21g1999 21 26887509 26888159 Lele23g0014 23 83428 84111 hybridization
Lele21g1999 21 26887509 26888159 Lele24g1916 24 23828644 23829333 hybridization