Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1987 ATGGCAGATGTCACCCACCTTTGCCACCGCGAACCTGACGACGATCCTCGCCTCCCTGACCAGACCCTAACTCTTGATTCTATCCCCTACTGGTCCCACGCCGATTTCGATTTCGATTTCGACTTTTATCCTTCCGATCCAGAACTCCCCCCGCCCGATTCTTCCCTCCGCCCTCACAACGCCCCTCGTGATCGTGCCTTGTCTCACCGATTTGAATCCACCATCTCTCTACAACGTGACGATAACTTCTCGGACCCCGGTTCGATTCCCTGCACCGATCTACTGGACCGCGAAAACCAGGTAAATTTCGTTATGGATTTGTTTCAGCAGCGTGTTGAGCAATCGCAGGTCATGGGTCTCAGTGATTTGGTCGAAGTCCTGGATAATTCTAATTTCGGTATTATTGACGGTCATTGCGACGTCGGTGTTGATGATTTGGGTGGGGATTTTGGATTTGGCTTGGATAGGGATTCTTTGCCGGGTGATGACATTAGTGGCTTTATGGTTGAAAATTATGGTTCTGGTGGTGGGGATGGTGACCGTTTTTTCGTTTCAAGGAGGTTTTCTGGATCCGAGTCCGTGGGGGCGCCGTCTATGGCAAGCCGAATTCAGCCTTTCGACAACTGTATACGGCTCGTGGAGTTCGGGTCAGATTCTGATGGGGAGGAGGATGGGGCTTGGGGTGTGCGCGCCCATTCGGAAGATGAATACAATGCGCATGATGAGAACGACGATGTTGCCAGCATTCCTCTTTACTGGGATTCATTACAATTGGAGGATAACAGGGATGATACCGAAGATTTTGAGTGGGAAGAAGTTGATGGTCGGGTTGATGAGAGGGAAGTTTTGAGCATGCTCACCGGTGAGGATGATGCGTCCTTATCAGTTTCAGTTTCCCCAATAAATGGGCTTGAAGAAGAAGTAAGTGTTATGAGAGCGGGAGGTGTGGAAAATTTGGGTTGGGAAGTGTTGCTGAATGCCAATAATTTGGACACGAACCCTGATTTGGATCACGATGCAGAACCTTATTTTGGTGATCATGATGACTATAGTTATACTGCAGAGTACGAAATGATGTTTGGCCAATTCGCTGACAATGAGAATCCCTTGGTTGGTCGGCCTCCAGCTTCCGTATCAGTTGTTCAGAATCTTCCATCAGTGATTGTGGCCAAACAAGATATCGACAACAATGGTGCACTTTGTGCAGTTTGTAAGGACGAGTTCAATGTTGAAGAACAAGCAAAGCAATTGCCGTGTTCACATTTCTACCATGGAGAATGCATTACCCCGTGGTTGGGAATTCGGAACACTTGTCCTGTTTGTCGATATGAGTTGCCTACTGATGATGCTGATTATGAGCTTGTGACTTGTAATTTCTTATCTAGTCCACAAGCATCACAAGAAGCTGACGTTGTGATTGAAGGTCCATTGTCTTTTGGGGGACTTCTTGCCCTTGAGTCAGGAACTTTTGAATATATTTTCATACTTGGCCATGAAGGTTCTTATGTCTTAGGTCACAGTCACACTATATTCCATTTCATTACTCTGTTACACCTTCCCAACAACACAATTCTGTTTATAGACCACAAACCCTGTCCAAACATTTCATCAAACAGTAACAACAGTGACAACATGAATGATTGTGGCGAAGGGAAGGGTGCTTCTGATGAGAGAAAGAGGAAAAGGATGTTCTCCAACAGAGAATCTGCTCGGAGGTCGAGGATGAGGAAGAAGCAGCAGATAGAAAACCTTCAGTATCAAGTGGATCATCTTCAGACCATGAACCATCAACCCTCCCAGAAGAGCATTTACTTGTTGGAAAGTAACCAGCAGATCCTCCAGCAAACAGTCAGCTCAAAGAGAAAATTTCTACACTTCAAATGGCCCTATCTGACATGTTGGTTGCTCTGCCTCGTGATGAAGAAGCTAATCACATCCCCAGTGCCCTCATTGCCGAGCCTCTGCTCCACCAGTTGA 1977 0.4664 MADVTHLCHREPDDDPRLPDQTLTLDSIPYWSHADFDFDFDFYPSDPELPPPDSSLRPHNAPRDRALSHRFESTISLQRDDNFSDPGSIPCTDLLDRENQVNFVMDLFQQRVEQSQVMGLSDLVEVLDNSNFGIIDGHCDVGVDDLGGDFGFGLDRDSLPGDDISGFMVENYGSGGGDGDRFFVSRRFSGSESVGAPSMASRIQPFDNCIRLVEFGSDSDGEEDGAWGVRAHSEDEYNAHDENDDVASIPLYWDSLQLEDNRDDTEDFEWEEVDGRVDEREVLSMLTGEDDASLSVSVSPINGLEEEVSVMRAGGVENLGWEVLLNANNLDTNPDLDHDAEPYFGDHDDYSYTAEYEMMFGQFADNENPLVGRPPASVSVVQNLPSVIVAKQDIDNNGALCAVCKDEFNVEEQAKQLPCSHFYHGECITPWLGIRNTCPVCRYELPTDDADYELVTCNFLSSPQASQEADVVIEGPLSFGGLLALESGTFEYIFILGHEGSYVLGHSHTIFHFITLLHLPNNTILFIDHKPCPNISSNSNNSDNMNDCGEGKGASDERKRKRMFSNRESARRSRMRKKQQIENLQYQVDHLQTMNHQPSQKSIYLLESNQQILQQTVSSKRKFLHFKWPYLTCWLLCLVMKKLITSPVPSLPSLCSTS 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1987 658 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 534 616 IPR044521 -
Lele21g1987 658 FunFam E3 ubiquitin-protein ligase RING1-like 362 448 - -
Lele21g1987 658 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 556 597 IPR004827 GO:0003700|GO:0006355
Lele21g1987 658 MobiDBLite consensus disorder prediction 537 577 - -
Lele21g1987 658 CDD bZIP_plant_GBF1 559 597 IPR045314 GO:0003700|GO:0006355
Lele21g1987 658 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 362 448 IPR013083 -
Lele21g1987 658 Pfam bZIP transcription factor 558 614 IPR004827 GO:0003700|GO:0006355
Lele21g1987 658 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 561 576 IPR004827 GO:0003700|GO:0006355
Lele21g1987 658 SUPERFAMILY RING/U-box 381 448 - -
Lele21g1987 658 Pfam Ring finger domain 401 442 IPR001841 -
Lele21g1987 658 Gene3D - 556 622 - -
Lele21g1987 658 Coils Coil 567 594 - -
Lele21g1987 658 FunFam BZIP transcription factor 556 604 - -
Lele21g1987 658 SMART ring_2 401 441 IPR001841 -
Lele21g1987 658 MobiDBLite consensus disorder prediction 550 577 - -
Lele21g1987 658 SMART brlzneu 554 618 IPR004827 GO:0003700|GO:0006355
Lele21g1987 658 ProSiteProfiles Zinc finger RING-type profile. 401 442 IPR001841 -
Lele21g1987 658 SUPERFAMILY Leucine zipper domain 558 614 IPR046347 GO:0003700|GO:0006355
Lele21g1987 658 CDD RING-H2_RNF126_like 401 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1987 Lele-ChrLele21 26818523 26821359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1987 18 448 C3H Transcription Factor Family AT5G60820 36.424 1.15e-55 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele21g1987 bZIP_1 4.6e-10 CL0018