Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1983 ATGCAGGAAATGCATTCCATCGCAGGAGGTAGATTGTTCGGCGCCGTGGGTGCCGCTGGTGACAGGAAGCTCAGGCCTCACCATCACACTCACAACAACGACAGCCAGAACCACCAGCCGTTGAAGTGCCCGAGGTGTGACTCCCTCCACACCAAGTTCTGCTATTACAACAACTACAACCTCTCTCAGCCGCGCCACTTCTGCAAGAGTTGCCGTAGATACTGGACCAAGGGCGGCGTCCTCCGTAATGTACCCGTCGGCGGCGGTTGTCGGAAATCTAAGTGCTCCAAGCCCAATAACACTTCCTTAGAAGCTTGCTGCGCCGCTACGACAACGGCACCGCCGCTGGGGCCGTCATCATCGCAACTGGAGCGCAAGCGTAAGACGTCCAACTCTCATTCCAGCAGTGAAAACTCCAGTCTTACAGCTGTCGCTGCCGCCGTCACCACAGAAGCGGTCTCAGCTCCTTCATCCAACTCCACGTCTAATAACTTGTTCGACAATCTTCAGGATTCGAACCTGGTCGTCCATTCCAATTCGAAGCCTAGACGTGAACCAGGCGTCACCGAAAAAGGAGAGTCCGGGATTTTCTCGGAGATAGAGAACTTGACGAGCCTGATCACACCCACTAACGGGACACTGGCGTTCGGATACGGGAATATCTCCGACGCGTCGTCGTTTCAGCTGTGCAGCCAGTGGCAGAAAGGGATGGACGCGAGCGATCGTCGTCACCAGGGCATGAAGTGGCCGGAGGCGACGACGGGATCGCTGATGGAGGAGACGGTGCCGGTGGATTTGTTGACGGTAGGAAGTAAAATGGGGAACGGAGGATTGGGGCCGCCGGATTGGCAAGGGAGCACGGATCATGAAGGTCTGTTTTATGTTGGGAACGCCGTAGATGAGGGTCTGTGGAATAACAATCAGTGGAATGAGGACAATTCGAGTCTTTTTCATCTGCCTTGA 963 0.5524 MQEMHSIAGGRLFGAVGAAGDRKLRPHHHTHNNDSQNHQPLKCPRCDSLHTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKSKCSKPNNTSLEACCAATTTAPPLGPSSSQLERKRKTSNSHSSSENSSLTAVAAAVTTEAVSAPSSNSTSNNLFDNLQDSNLVVHSNSKPRREPGVTEKGESGIFSEIENLTSLITPTNGTLAFGYGNISDASSFQLCSQWQKGMDASDRRHQGMKWPEATTGSLMEETVPVDLLTVGSKMGNGGLGPPDWQGSTDHEGLFYVGNAVDEGLWNNNQWNEDNSSLFHLP 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1983 320 MobiDBLite consensus disorder prediction 116 141 - -
Lele21g1983 320 Pfam Dof domain, zinc finger 39 94 IPR003851 GO:0003677|GO:0006355
Lele21g1983 320 ProSitePatterns Zinc finger Dof-type signature. 43 79 IPR003851 GO:0003677|GO:0006355
Lele21g1983 320 ProSiteProfiles Zinc finger Dof-type profile. 41 95 IPR003851 GO:0003677|GO:0006355
Lele21g1983 320 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 30 199 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1983 Lele-ChrLele21 26790766 26791728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1983 21 320 C2C2-Dof Transcription Factor Family AT5G60850 33.866 2.99e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele21g1983 zf-Dof 5.8e-32 No_clan